Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi33g00009 | ATGGCAGTTTCTGAATTAACCGCCGACGTGTTCCCATGGCTGAAATCCATGCCACTGGCCCCGGAGTACCGACCAACCGCCGCGGAATTCGAAGATCCGATCGGTTACATTTTCAAGATCGAGAAAGAAGCTTCTCAGTACGGAATCTGCAAAATCGTTCCACCGTTTCCGCCGTCACCCAAGAAAACCGCCATAGCTAACCTCAACAGGTCACTGGTTAATTCCACATTCACCACACGTCAGCAGCAGATCGGGTTCTGTCCACGGAAGTCCCGACCCGTCAAACGACCCGTCTGGCAGAGTGGGGACCACTACACTTTCGCTGAGTTCGAAGCGAAAGCGAAATGGTTCGAGAAGAGTTACATGAAGAAGCATAACAAGAAGGGTGGTGTTAGTGGTAGTGGCAATGCTCTTGAAACGGAGACGATGTTTTGGAAGGCTACTGTTGATAAACCGTTTTCAGTTGAGTATGCGAACGACATGCCTGGCTCTGCGTTTTCGGCGCAATGTAGGCATGCTGGTGAGGCTGCTTCGGTGGCTCATAGTGCTTGGAATATGAGAGGGGTTTCGAGGGCGAAAGGGTCTTTGTTGAGGTTTATGAAGGAGGAGATTCCCGGGGTTACTTCGCCTATGGTTTATCTTGCTATGCTATTCAGCTGGTTTGCGTGGCATGTTGAGGATCATGATCTTCATAGCTTGAATTATCTTCATATGGGCGCTTCTAAGACGTGGTATGGTGTTCCTAGGGATGCTGCTGTTGCTTTTGAGGATGTTGTTAGGGTTCATGGCTATGGTGGAGAGATTAACCCTCTTGTTACATTTTCTATTCTGGGTGAGAAAACCACAGTGATGTCACCAGAAGTGCTTGTCAGTGCAGGTGTTCCATGCTGCAGGTTAGTGCAAAATGCTGGAGAGTTTGTTGTGACATTTCCAAGAGCCTATCACACAGGGTTTAGTCATGGTTTTAATTGTGGAGAGGCAGCAAACATAGCAACACCTGAGTGGTTGAGGGTTGCTAAAGATGCTGCTATTCGAAGGGCTTCAATAAATTACCCTCCCATGGTTTCACATTTCCAGTTACTTTATGACCTTGCCTTAGCTTTGTGTTCTAGAATCCCTGGAGGAATCAGTGCTGAACCACGGAGTTCTCGTCTTAAAGATAAAAAGAAGGGTGAAGGAGATTCTGTAGTCAAAGAACTATTTGTCCAAGACGTGTTACGAAACAATGATCTACTTCATGTACTCGGAAAAGAATCTTCTGTAGTACTTCTTCCTCGCAGTTCAGTTGACATTTCTATTTGCTCAAAATTACGCGTCGGATGCCAGCAGCAAAAAGTGAACCCTGAATTTTCCATTAATGTATGCAATTCCAAGGGAATGAATTCCTCAAAAGGTTTTGTTTCTGATGATCTGGTATTCAACAGAAATTGTGGAATCCTGCAAGAAAAAAAATTCCATTCTGTGAAAGACAAGTTTACTCTGTTGTGTGAAGGGAAGGGTATTTCCTCTTTTGATGCAAACGGTAGCACATCCCCTTCAAGTTCTAAGCAACTTCAAACAGACAACAACTGTGAATCGAATCAAGAAGACGGGTTGTCAGATCAGAGACTGTTTTCGTGTGTCACATGTGGACTATTAAACTTTTCCTGTGTTGCTATTGTACGTCCTAGCGAACTAGCAGCTAGATATCTTATCTCTGCTGGTTGTAGCTCCTTTAATGATTGGGTTGTTGGTTCTGGGGTACCTAACAATAAAACTACTCTTGCTCACGAAGATGCAAATAATCCGGAGCCAAATATGCATACAGGGTGGACGAAGACTAATACCCAAGTAGAGGCTGTAAATACTGAAGGAGGAAATGACAATACAGCTCTTGCATTATTGGCTTCGGCATATGCAAATTCTTCCGACTCTGAGGAAGATGCAATTGACGATCATGAATTGAATGCGATAAACTCTACATCTGAAAGTTTCCCTTCTAATGTTCAGGCTTCCCATGCTAATCCCATGACTAGACATGATAAAGATGATATTCTTTCAGAGAGCACCAGTTACCAAGCACATATATCTGAGGTTAATTTGAATCGGCCTCAAGAACAATCATTTGCGGAACAGAATTATAAAGTTACTTCAGAGGCTGCATTTGAAAATACAAGGCCAGTGCCTTATTCCATTTCATATAGTTCCCAAGATGCTAATAATGCTGAAAAGTCTTTGTCGGCCGAAGCCATGGTTGCTGTCAATCATAAAAATGCTTTATTGGTACCACAATGTGACGAAGACTCAACTAGAATGCATGTATTCTGTCTAGAGCATGCTGTAGAAGCAGAGCAGCAACTTCGGCCAATAGGTGGAGCCCATATAGTGCTCTTATGTCATCCAGATTATCCCAAGATAGAAGCTGAGGCAAAGTTGTGGGCAGAAGATTTGGGGATTGATTATTCATGGAAGAATATTGCCTACAGGCATGGCACCAAGGAAGATGAGGAGAGGATCCAAGCTGCTGTGGATAGTGAAGAAGCAATTCCCGGGAATGGGGACTGGGCTGTAAAGCTAGGAATAAATCTCTTTTATAGTGCAAATCTTAGCCGCTCTCCTCTTTATAGCAAGCAGATGCCTTACAATCCTGTTATATATTATGCATTTGGTCGTAGCTCTCCAGCAAGCTCGCCCATAGAACCAAAGGTCTATCAGAGAAGGACTGACAGGCAGAAAAAGGTAGTTGCTGGCAAATGGTGTGGTAAAGTTTGGATGTCTAATCAGGTCCATGCCCTTTTAGCAAAAATGGATTCTGAAGATGTTGAGGATGAGGAAATTTTACATAGATTGATATCACCTGACGTGAAAATTGAAAGATCGGGAAGTACCCCCAAAACTGAAACTGCTAGTACTAAATCCGGTAGGAAAAGGAAAATGTTCTTAAACAAAGGACGGACCAGGAAAGGAAGTTTTGTTGAAAATGAAATGGTTTTGGAAAATTCCACTGAAGATAAATCAAATAAATCAAATCCTCAGGAAAGGAGGATTCTTAGAAGCAAGCAAGCTAAGGGTGTTGAGAAAGATGGTGCAGCTTTGCACAGGGATTTTTCTCCATATCGTCGTAGAAAACCAATGAGCAAACAAAAAAATTGCACTGAAAGTGATGTAGTTTCTGATGATCAATTTATTGACAATGATGTGGTTTCAGATGATGCAGTGGACTATGATTCTGATTGTCATCAGATGGGAGAACTTAGAAGCAGTCAAGTTGAAGATACAGAGAGAGACTCAATTTCAGAGGATTCTTTGGATGTCGGTTCTCTTCAGTTGCAAATAGAGACTTCTAGAAGCAAGCATGCCAACGTCATTAGTGAAGACGATGCAATTTCTGATGACCAAATGGAGAATGGTTGTCAGAAGCAACGCAAGAGAATTCCTAAAAGCAGGAAAGGAAATTCCCTTGCTGAAAAAGATTCAGTGACATCTGATGACCAACTGGAGCTGAACATCCAGAAACAGCGCAGGGGTAATTCTAGAAGTAGGAAACTCAAATACCTCCATGAAGATGATATTGTATCGGATAACCAAACAAATATCTATTGTCGCAAGTACCAAAGAAGAACAGTTAAAGTCAGGCAAGCCAAATGTGTAGCAAGGGAAGATGTAATGTCTGACGATCAATTGGATGATCCCTATCAAAAGCAGAAACCAAGAATTTCTAGAAGGAAAAACAAAGGCATTAATAGAGAATTTAAAAATGAAGTGTCCGATGACCAACAAGATGGCCACTTTCAGAAGCAGCAGCAAAAAATTCCGAAGAGCAGGAGGCACACCATACAGACTGATGAAGAAGTTATCGATGACTCGGCTGATGACAATGCCTGTCTGCTGCATAGAACTTCTAAAAGGAAGAAAGCTAAATTCAAGGATGAAGATGATATGAGTTTAGATAATGAAATAGAAGATGATTCTCTTCCGCAGCACAAAACTCTTCCAAGTAAACAATCAAAACCAAAGACACTTAAACAGATGAAACAATCCAAATCTTTCTCGATGAAAAACCAGACACCTCGGCCAGTGAAACGAGGGGCTCAGATGCTGATGAAATCAAAGGTTGCTCAGCAAGTAAAGCAGCCTTCTCATTTGCGAAATAAACAATCTGGTAACTCCAGAGAGCCTAGTTTAGATTTGGAAGAGGAGGATGTAGGTGGACCTAGCACACGCCTTAGAAAGAGACTCCCAAAAGCTCAGGAGTCTGAAGTAAAATCAAAAGACAAACAAACCAAAAGGAAAAGAACAAAGGATGCTACAGCAGCTACTCATGTTTCAGCTCGCAATGCCAAAACAGAGAACGAGGAAGCAGAATATCAGTGTGACATCGAGGGATGCACCATGAGTTTTGAGTCAAAACAGGAGCTGCTGCAGCATAAGAAAAATATCTGTCCAGTAAAAGGTTGCGGGAAAAAGTTCTTTTCACACAAATATCTGGTGCAGCACCGGCGAGTTCATGAAGATGACCGCCCGCTCAAGTGTCCCTGGAAGGGGTGCAAGATGTCTTTCAAGTGGGCATGGGCTCGAACTGAGCATATCCGAGTCCACACCGGTGCACGTCCTTATATATGTGCGGAGCCAGGTTGTGCACAAACATTCAGATTTGTGTCTGATTTCAGTCGTCATAAGCGGAAGACTGGTCATTTAACAAAGAAGAGTCGTCAATAA | 4698 | 0.4272 | MAVSELTADVFPWLKSMPLAPEYRPTAAEFEDPIGYIFKIEKEASQYGICKIVPPFPPSPKKTAIANLNRSLVNSTFTTRQQQIGFCPRKSRPVKRPVWQSGDHYTFAEFEAKAKWFEKSYMKKHNKKGGVSGSGNALETETMFWKATVDKPFSVEYANDMPGSAFSAQCRHAGEAASVAHSAWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGASKTWYGVPRDAAVAFEDVVRVHGYGGEINPLVTFSILGEKTTVMSPEVLVSAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALCSRIPGGISAEPRSSRLKDKKKGEGDSVVKELFVQDVLRNNDLLHVLGKESSVVLLPRSSVDISICSKLRVGCQQQKVNPEFSINVCNSKGMNSSKGFVSDDLVFNRNCGILQEKKFHSVKDKFTLLCEGKGISSFDANGSTSPSSSKQLQTDNNCESNQEDGLSDQRLFSCVTCGLLNFSCVAIVRPSELAARYLISAGCSSFNDWVVGSGVPNNKTTLAHEDANNPEPNMHTGWTKTNTQVEAVNTEGGNDNTALALLASAYANSSDSEEDAIDDHELNAINSTSESFPSNVQASHANPMTRHDKDDILSESTSYQAHISEVNLNRPQEQSFAEQNYKVTSEAAFENTRPVPYSISYSSQDANNAEKSLSAEAMVAVNHKNALLVPQCDEDSTRMHVFCLEHAVEAEQQLRPIGGAHIVLLCHPDYPKIEAEAKLWAEDLGIDYSWKNIAYRHGTKEDEERIQAAVDSEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNPVIYYAFGRSSPASSPIEPKVYQRRTDRQKKVVAGKWCGKVWMSNQVHALLAKMDSEDVEDEEILHRLISPDVKIERSGSTPKTETASTKSGRKRKMFLNKGRTRKGSFVENEMVLENSTEDKSNKSNPQERRILRSKQAKGVEKDGAALHRDFSPYRRRKPMSKQKNCTESDVVSDDQFIDNDVVSDDAVDYDSDCHQMGELRSSQVEDTERDSISEDSLDVGSLQLQIETSRSKHANVISEDDAISDDQMENGCQKQRKRIPKSRKGNSLAEKDSVTSDDQLELNIQKQRRGNSRSRKLKYLHEDDIVSDNQTNIYCRKYQRRTVKVRQAKCVAREDVMSDDQLDDPYQKQKPRISRRKNKGINREFKNEVSDDQQDGHFQKQQQKIPKSRRHTIQTDEEVIDDSADDNACLLHRTSKRKKAKFKDEDDMSLDNEIEDDSLPQHKTLPSKQSKPKTLKQMKQSKSFSMKNQTPRPVKRGAQMLMKSKVAQQVKQPSHLRNKQSGNSREPSLDLEEEDVGGPSTRLRKRLPKAQESEVKSKDKQTKRKRTKDATAATHVSARNAKTENEEAEYQCDIEGCTMSFESKQELLQHKKNICPVKGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMSFKWAWARTEHIRVHTGARPYICAEPGCAQTFRFVSDFSRHKRKTGHLTKKSRQ | 1565 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi33g00009 | 1565 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1534 | 1558 | IPR013087 | - | |
Vivi33g00009 | 1565 | SUPERFAMILY | Clavaminate synthase-like | 192 | 361 | - | - | |
Vivi33g00009 | 1565 | SMART | c2h2final6 | 1472 | 1496 | IPR013087 | - | |
Vivi33g00009 | 1565 | SMART | c2h2final6 | 1502 | 1526 | IPR013087 | - | |
Vivi33g00009 | 1565 | SMART | c2h2final6 | 1449 | 1471 | IPR013087 | - | |
Vivi33g00009 | 1565 | SMART | c2h2final6 | 1532 | 1558 | IPR013087 | - | |
Vivi33g00009 | 1565 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1488 | 1530 | IPR036236 | - | |
Vivi33g00009 | 1565 | MobiDBLite | consensus disorder prediction | 653 | 668 | - | - | |
Vivi33g00009 | 1565 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1502 | 1531 | IPR013087 | - | |
Vivi33g00009 | 1565 | MobiDBLite | consensus disorder prediction | 1364 | 1384 | - | - | |
Vivi33g00009 | 1565 | FunFam | Probable lysine-specific demethylase ELF6 | 1499 | 1528 | - | - | |
Vivi33g00009 | 1565 | Gene3D | Classic Zinc Finger | 1470 | 1556 | - | - | |
Vivi33g00009 | 1565 | MobiDBLite | consensus disorder prediction | 506 | 527 | - | - | |
Vivi33g00009 | 1565 | SMART | cupin_9 | 178 | 347 | IPR003347 | - | |
Vivi33g00009 | 1565 | MobiDBLite | consensus disorder prediction | 653 | 674 | - | - | |
Vivi33g00009 | 1565 | MobiDBLite | consensus disorder prediction | 981 | 1028 | - | - | |
Vivi33g00009 | 1565 | MobiDBLite | consensus disorder prediction | 1322 | 1351 | - | - | |
Vivi33g00009 | 1565 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1532 | 1563 | IPR013087 | - | |
Vivi33g00009 | 1565 | MobiDBLite | consensus disorder prediction | 1385 | 1431 | - | - | |
Vivi33g00009 | 1565 | ProSiteProfiles | JmjN domain profile. | 20 | 61 | IPR003349 | - | |
Vivi33g00009 | 1565 | MobiDBLite | consensus disorder prediction | 1310 | 1441 | - | - | |
Vivi33g00009 | 1565 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1472 | 1501 | IPR013087 | - | |
Vivi33g00009 | 1565 | SMART | JmjN_1 | 19 | 60 | IPR003349 | - | |
Vivi33g00009 | 1565 | MobiDBLite | consensus disorder prediction | 950 | 1028 | - | - | |
Vivi33g00009 | 1565 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1504 | 1526 | IPR013087 | - | |
Vivi33g00009 | 1565 | MobiDBLite | consensus disorder prediction | 1237 | 1257 | - | - | |
Vivi33g00009 | 1565 | MobiDBLite | consensus disorder prediction | 1218 | 1278 | - | - | |
Vivi33g00009 | 1565 | MobiDBLite | consensus disorder prediction | 1118 | 1155 | - | - | |
Vivi33g00009 | 1565 | Pfam | jmjN domain | 21 | 54 | IPR003349 | - | |
Vivi33g00009 | 1565 | Gene3D | Cupin | 13 | 351 | - | - | |
Vivi33g00009 | 1565 | ProSiteProfiles | JmjC domain profile. | 178 | 347 | IPR003347 | - | |
Vivi33g00009 | 1565 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1474 | 1496 | IPR013087 | - | |
Vivi33g00009 | 1565 | Pfam | JmjC domain, hydroxylase | 211 | 329 | IPR003347 | - | |
Vivi33g00009 | 1565 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE | 12 | 1498 | - | - | |
Vivi33g00009 | 1565 | FunFam | Probable lysine-specific demethylase ELF6 | 13 | 351 | - | - | |
Vivi33g00009 | 1565 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1520 | 1554 | IPR036236 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi33g00009 | 764 | 865 | C2H2 Transcription Factor Family | AT5G04240 | 31.373 | 5.87e-14 | 75.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Vivi33g00009 | JmjC | 1.6e-36 | CL0029 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi33g00009 | - | - | psat:127084261 | 2808.86 |