Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi337g00030 ATGAGGAACACCGGAGGAGAGATAGTTCAAGTTGGAGGAGGACACATAGTTCGATCCTCCGGTAAGAAAGATCGTCACAGCAAGGTTTACACATCGAAAGGACCTCGCGATCGCAGGGTTCGTCTCTCAGCACACACTGCCATTGAATTCTACGATGTTCAAGATCGTCTTGGCTATGACAGACCAAGTAGAGCAGTGGACTGGCTCATCAGAAAAGCAAAACCTTCCATTGACAAGCTCGCCGAGCTTTCTTCGTGGCAACCGACCGGCGAAACTCAAACCCTAAACCCTCAAGAGGAAGAACAGAATGTAGCTGCACTCTCAACTGACATGGTTATGGGAGAATCATCAAATGCTTACAATTTTCATCTGTTAAGTCAATTGAGTGAAGATCAAGGTAACCCTAGTTCAGGTTTCATTTCTCCACATAACGTTGAAATTACTGATCCTATACCTTTCTTTCCAACTACCTCTTCTAATTCTTCATCTATCAATTTTCAAAACTACCCTTCTGAAAACCTTGGACTCTCTCTTCATTCCTTCCAAGATCACAATGGTTTCATTCCTTGGCAATCACAACAGCCATGTGAAAACCAAAACCAAAACCATGACCAAACACTTTTTGATAATAACCAGTATCATGGGAATTGGAGCAATGAAACAACTAATGATTATATACAGAAAGTAGGGTTCATGGTAAACTCAAATCCATTTCTAGGACAAGGTTCAGATTACACTCCAAACGAGACACTTGAGTCGAATTTTTCGCAGTCAGTTCGATCTTGGAATGAAATTCCTATGGATTCTTCTTCAGAGGTTCATCAGAGATCACAACAAGTTCATCATCAAGCTTCAATCTTTGGAAGCAGGTTTGTTTCTGATGGATTACCAGGTTTCTGCATTCTTGATACAGTTCAAGATGGAGAAGAGGGTCATGGAGTTTCTTCTAATAGGCCTTCTTCTGTTTCTCCTAACAACAACTGA 984 0.4136 MRNTGGEIVQVGGGHIVRSSGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSRAVDWLIRKAKPSIDKLAELSSWQPTGETQTLNPQEEEQNVAALSTDMVMGESSNAYNFHLLSQLSEDQGNPSSGFISPHNVEITDPIPFFPTTSSNSSSINFQNYPSENLGLSLHSFQDHNGFIPWQSQQPCENQNQNHDQTLFDNNQYHGNWSNETTNDYIQKVGFMVNSNPFLGQGSDYTPNETLESNFSQSVRSWNEIPMDSSSEVHQRSQQVHHQASIFGSRFVSDGLPGFCILDTVQDGEEGHGVSSNRPSSVSPNNN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi337g00030 327 MobiDBLite consensus disorder prediction 310 327 - -
Vivi337g00030 327 Pfam TCP family transcription factor 21 127 IPR017887 -
Vivi337g00030 327 MobiDBLite consensus disorder prediction 1 38 - -
Vivi337g00030 327 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 279 IPR005333 GO:0003700
Vivi337g00030 327 MobiDBLite consensus disorder prediction 18 38 - -
Vivi337g00030 327 MobiDBLite consensus disorder prediction 308 327 - -
Vivi337g00030 327 ProSiteProfiles TCP domain profile. 22 80 IPR017887 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi337g00030 5 188 TCP Transcription Factor Family AT2G31070 48.058 3.08e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi337g00030 TCP 2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi337g00030 - - gmx:100814907 299.671