Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi337g00026 ATGGCTCAATTGCCACCCAAAGTTCCAACTCCAAACATGACACAACCTTGGCCTGAATTTTCTCCTCATCAAAAAATGCCTAACCTTAAAGCTATTTCACCACTCAATGCTTCAAACTTTTCCAACAGTCAACAAAACCCTTCGTGGGTGGACGAGTTTCTCGACTTCTCTTCCACCAGACGGGGGGCTCACAGACGGTCGGCGAGTGATTCTGTGACTTTCATCGAGGCGTCAATGATGGAGCATTGTCGCGGTAGAGACGGGGGCAACGAGTTTGAAAGGTTTGATGATGAGCAACTGATGTCTATGTTTGGTGTGGATGAGGTTTCTGGGAAAAACATGATGCAGGCGCCTGCAAGAGCAGTAGCGGCTACATTGTCCTCTAACTCAAACCCTTCAACTCCTTCTGATAATAACAGCATCAATGATGAAAAAGAGGACGAGGAGGATGAAAAGTATCACCAAAAGAAACAATTGAAGCATGAATCTGATGAGGATGAATTCGATGAATGCAAACAGGAAATTGCACGAGTCGTCAATGATGATGAGGATGATACTAATGGAAACACAGCAACTTATTCAAGTCAGAAAATTACTGATCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCTGCACAGAGATCAAGAGTGAGGAAACTGCAATACATATCAGAGCTTGAGAGAAGTGTGACTTCATTACAGGCAGAAGTATCAGTACTGTCACCACGAGTTGCATTTCTGGATCATCAGAGGTTGCTTCTAAATGTTGATAACAGTGCTCTCAAGCAAAGAATCGCAGCTCTTGCCCAAGACAAAATCTTCAAAGATGCTCATCAAGAGGCCCTGAAGAGGGAGATAGAGAGGCTGAGACAAGTGTATCACCAACAAAACATCAAGAGTAATGCTACTACAGTAGTGTCACCATCTCCATCACCTAAACCACCTTGTGATAATGATACTCACATTGAAAATGAACATCTTATCAATGTTTGA 999 0.4294 MAQLPPKVPTPNMTQPWPEFSPHQKMPNLKAISPLNASNFSNSQQNPSWVDEFLDFSSTRRGAHRRSASDSVTFIEASMMEHCRGRDGGNEFERFDDEQLMSMFGVDEVSGKNMMQAPARAVAATLSSNSNPSTPSDNNSINDEKEDEEDEKYHQKKQLKHESDEDEFDECKQEIARVVNDDEDDTNGNTATYSSQKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKSNATTVVSPSPSPKPPCDNDTHIENEHLINV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi337g00026 332 MobiDBLite consensus disorder prediction 1 47 - -
Vivi337g00026 332 CDD bZIP_plant_RF2 203 253 IPR044759 GO:0003700|GO:0006355
Vivi337g00026 332 SMART brlzneu 198 262 IPR004827 GO:0003700|GO:0006355
Vivi337g00026 332 MobiDBLite consensus disorder prediction 122 139 - -
Vivi337g00026 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 205 220 IPR004827 GO:0003700|GO:0006355
Vivi337g00026 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 200 252 IPR004827 GO:0003700|GO:0006355
Vivi337g00026 332 MobiDBLite consensus disorder prediction 147 184 - -
Vivi337g00026 332 MobiDBLite consensus disorder prediction 120 198 - -
Vivi337g00026 332 Gene3D - 201 272 - -
Vivi337g00026 332 MobiDBLite consensus disorder prediction 31 47 - -
Vivi337g00026 332 MobiDBLite consensus disorder prediction 301 332 - -
Vivi337g00026 332 SUPERFAMILY Leucine zipper domain 202 256 IPR046347 GO:0003700|GO:0006355
Vivi337g00026 332 FunFam Basic leucine zipper 61 201 274 - -
Vivi337g00026 332 Pfam bZIP transcription factor 202 246 IPR004827 GO:0003700|GO:0006355
Vivi337g00026 332 MobiDBLite consensus disorder prediction 1 16 - -
Vivi337g00026 332 Coils Coil 281 301 - -
Vivi337g00026 332 Coils Coil 142 162 - -
Vivi337g00026 332 PANTHER BASIC LEUCINE ZIPPER 34 1 309 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi337g00026 1 279 bZIP Transcription Factor Family AT3G58120 55.556 6.22e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi337g00026 bZIP_1 3.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi337g00026 - - lang:109363232 385.571