Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi337g00001 ATGATTGAGGAAGAAAAAGAAGAAAAATATATAAATATGACTCATTGCAATGAGGTTCAAAATAATCATAGCATCAATGTTGAAGGAAGAAAGGACAGTTTAATTAGAACTTGTCTCACATGTGGTCATCATATCAAATGCCAAGATCAGGGTGGTGGAATTAATGACTTACCTGGATTACCTGCTGGAGTGAAATTTGATCCAACAGATCAAGAGATTCTTGAACATTTGGAAGCAAAAGTGAGGTCTGATATTCATAAACTCCATCCTCTAATTGATGAGTTTATACCTACTCTTGAAGGAGAGAATGGAATTTGCTATACTCATCCAGAGAAATTACCAGGTGTAAGCAAAGATGGCCTAATCCGCCATTTCTTCCACAGACCATCCAAGGCATACACAACAGGAACAAGAAAAAGAAGAAAAGTACATTCAGATCACGAAGATGGCAGTGAAACCCGTTGGCACAAAACAGGAAAAACAAGACCAATCTACAACAATTCCAAGTTAAAAGGATACAAAAAAATCCTCGTACTTTACACTAACTATGGAAAGCAAAGAAAGCCAGAGAAAACAAGTTGGGTGATGCATCAATATCATCTAGGGAATGATGAAGAAGAGAAAGAAGGAGAGTTAGTTGTGTCCAAGGTTTTCTATCAAACTCAACCAAGACAATGTGGTGGCAACTCATTGATGATGAAAGAGTCTATTGTGAAGGGTCAAAGTGGGAATAATATTGAGGTAATGAATGGTGAGAAGAGTATTAGTGGATCATTTGTTGAGTATTATCATTCAAATTTCATATCATTTGATCAAGGGAATCAACATAGATCATCTAGTAATAATGCTCAAGTGATTTCACATTTTGAAGGGGCTCCTATTTGA 885 0.3627 MIEEEKEEKYINMTHCNEVQNNHSINVEGRKDSLIRTCLTCGHHIKCQDQGGGINDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDHEDGSETRWHKTGKTRPIYNNSKLKGYKKILVLYTNYGKQRKPEKTSWVMHQYHLGNDEEEKEGELVVSKVFYQTQPRQCGGNSLMMKESIVKGQSGNNIEVMNGEKSISGSFVEYYHSNFISFDQGNQHRSSSNNAQVISHFEGAPI 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi337g00001 294 Gene3D NAC domain 69 224 IPR036093 GO:0003677|GO:0006355
Vivi337g00001 294 ProSiteProfiles NAC domain profile. 60 220 IPR003441 GO:0003677|GO:0006355
Vivi337g00001 294 MobiDBLite consensus disorder prediction 134 161 - -
Vivi337g00001 294 FunFam NAC domain-containing protein 73 69 224 - -
Vivi337g00001 294 Pfam No apical meristem (NAM) protein 61 201 IPR003441 GO:0003677|GO:0006355
Vivi337g00001 294 MobiDBLite consensus disorder prediction 139 159 - -
Vivi337g00001 294 SUPERFAMILY NAC domain 56 220 IPR036093 GO:0003677|GO:0006355
Vivi337g00001 294 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 30 252 IPR044799 GO:0003700
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi337g00001 13 229 NAC Transcription Factor Family AT4G28500 70.306 9.38e-116 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi337g00001 NAM 3.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi337g00001 - - gmx:100797459 476.863