Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi333g00041 ATGCAATCCTTGTACTTGTTCATCTTGTTTATGTTTTTGTTCTTCTCAGAAGCATCACTAGCTTCAATCAAATCCAATAATAGAAGGATCCTTCATGAACCCTTTATACCGTTAAACTCTCTCCCTCCATCAGAACTACCTAAACCACCACCGCCACCGTCACTTCATTCTCCACCCTCAACTCCAAACACCAAACACCCATTTTCCACCACCGGTCCCACCACAGTTCCCACGGACAACAACAACCCAAACCAAAACCAATACCCAAATGAATCACCGTTTTTCCCAAACTACCCTCTCTCACCACCACCACCTTCACCACTCACCTTTGCTTCATTCCCAGCTAACATCTCTGCCCTAATTCTCCCTCACACTCCTCAACCAGCTTCCTATTCTAACAAACTCATCCCCATTGCACTCTCCGCCACTGCCATAGCCGCCGTCGCTGTTATCATCTCCGGTTTCCTTTACTTCCGCAGACGCCGATATAACCGTCGCGCCTCCACCGACCACAAGACTCTAAGATCCGATAGTAGCCTCGAACTTTTCCCGCGCAATGTCGAAACCGCGGTCGATGTAAACCCCTCCGAGTTTCTCTACCTTGGTACAGTAGTAAATTCGCGACAAATTGACGTTGCTCCTCCTCGCGGTGGCGCTTCGGTGTCTCGAAAACTTGAGTCGCCGGAGCTCCGTCCTCTCCCGCCGTTAGCACGACTACCGGTACCTCCTCTACCACCGCCACATAACAACACTTATTCAGATGAAGAAGACGAGGAGTTCTACTCGCCGAGAGGCTCCTCTCTTGGTTGCCTAGAAAGCTCAGGTGGCACAGGATCGGGTTCCCGACGAGCATTCTCCGCCATAGCCGCTGGGAGAAATGGCGAATCGAGCTCAATTTCATGTTCTTCGTCTTCTTTCGGTTCTCCGGCGCAGTCTCATTCGATTAGCCTCTCACCGCCGGCGAGTTCTAGTCCCAGGAGAACACAACAAAAATCACCTGAAACTACACCAATTCAGAACCAACATGTGCAATATCGTTCTTCTTCTTCATCATCATCATCACGCTCAACACCAGAGAGAGATTTCGATGAAGAAAAAGAAAATGCTTCTTTACCCTCAAAAGCACATGCATCATCATCATCATCATCATCATCATCACTGTCATTACAAGAGAGATTCATGGAGAAAAATGAAAATGCTTCTTTATCAGAACAACAACCAAGGTTATCCAATCATTCAAGTGCTTCATCTTCAGCTTTTTCTCTTCCTTCTTCACCGGAGAAAATGATGATGATGCATCAAGGTTTTGATCAGTCTCCACGAATGTCGAGTGTCTCCGATGGGTTAAAGCTACCCGGTCTGTCATCATTGCCATTGTCACCCGCCCTACTTTCATCCCCTGAAACAGAAAGAGGAGGGTTTAGCTGCAATCCAAATCAATGGGGAACATTTTCTTATGCTATGCATGCGCCACAGAGGAAACATTGGGAGGTACCGGTTCTCCCAAAGCCTATAGCTCCTCCACCGCCTCCTCCTCTGCCACGGCAGAGGAGGCATTGGGAAATGTCAGCAACCTCGGCTATTGTTGATCAGCCTCGGTCGATTTTGAAGCCGCCTGTGTTAGCACCTCCTTCGAGGCCTTTCGTGTTGCAAAACCAAACAACAAATGAGTCTTTGGGGGAAATTGAAGAGAGTTCGAAACTTAAATTGAAGCCATTGCATTGGGACAAAGTGAGAACAAGTTCTGATCGCGAAATGGCATGGGATCAGATGAATTCCATGTCGTTTAAATTGAATGAGGAAATGATTGAGACATTGTTTGTAGTGAACACATCAAACCAAAAACCGAAGGATACTACTCCACGTTCCGTTCTTCCCTTGCCAAACCAGGAGAACAGAGTACTCGATCCGAAGAAGTCTCAAAATATTGCAATCTTACTCAAGGCTCTTAATGTTACAATAGAAGAAGTGTGTGAAGCACTTTTAGATGGTAGTAGTGATACACTTGGAGCAGAGCTACTTGAAAGTTTGTTAAAAATGGCACCAACCAAGGAAGAAGAACGTAAATTGAAGGAGCATAAAGATGACTCACCGACCAAGCTTGATGTGGCTGAGAACTTCTTGAAGGCGATGCTTGATATACCTTTTGCATTTAAAAGGGTCGAAGCAATGCTTTACATGGTCAACTTTCAATCTGAAATAGAGTATCTTAGAAAATCATTTCAAACTCTAGAGGTTGCCTGTGAAGAGTTGCGAAGTTGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTACTTAAAACTGGGAACCGAATGAACGTGGGAACAAATCGTGGTGACGCGGAGGCCTACAAACTCGATACACTTCTCAAATTGGCTGATGTCAAAGGTGCAGATGGGAAAACCACTCTACTGCATTTTGTCGTACAGGAAATTATTAGAACCGAAGGTGCTCGTCTCTCTTCTACTAACCAGACTACAAACTCTACTTTGACCGAAGATGTTAAGTGCAGGAGACTTGGCCTACAAGTTGTTTCTAATCTGAGTTCAGAGTTATCAAATGTTAAGAGGGCCGCCACTATGGACTCTGAACTTCTCAGCAGCGATGTCTCTAAACTTTCCAAAGGAGCTACAAACATAGCTGAGATTGTGAAATTAATCGAAAAGGCGGGATTGGATGAAACCAGTAAAAAATTTACAGAATCGATGAACAATTTTGTTAAAATGGCTGAGGACGAAATCATGAAAATTCAAGCACAAGAAAGTGTTGCTATGACCCTTGTGAAGGAGGTCACAGAATATTTTCATGGAAACTTATCAAAGGAAGAAGCTCATCCATTCCGAATCTTCTTGGTTGTAAGAGATTTTATAGCGGTTCTTGACCGTGTCTGCAAAGAAGTCGGTATGATAAACGAGCGAACTACGGTTAGTTCGGCTCATAAATTTCCCGTTCCAGTTAATCCAATGCTTCCGCAACCTCTTCCTGGATTACACGACAGGAAACATTGTAGTAGTAACTCTTCAGATGATGAAAGTACATCATCACCTTAG 3048 0.4475 MQSLYLFILFMFLFFSEASLASIKSNNRRILHEPFIPLNSLPPSELPKPPPPPSLHSPPSTPNTKHPFSTTGPTTVPTDNNNPNQNQYPNESPFFPNYPLSPPPPSPLTFASFPANISALILPHTPQPASYSNKLIPIALSATAIAAVAVIISGFLYFRRRRYNRRASTDHKTLRSDSSLELFPRNVETAVDVNPSEFLYLGTVVNSRQIDVAPPRGGASVSRKLESPELRPLPPLARLPVPPLPPPHNNTYSDEEDEEFYSPRGSSLGCLESSGGTGSGSRRAFSAIAAGRNGESSSISCSSSSFGSPAQSHSISLSPPASSSPRRTQQKSPETTPIQNQHVQYRSSSSSSSSRSTPERDFDEEKENASLPSKAHASSSSSSSSSLSLQERFMEKNENASLSEQQPRLSNHSSASSSAFSLPSSPEKMMMMHQGFDQSPRMSSVSDGLKLPGLSSLPLSPALLSSPETERGGFSCNPNQWGTFSYAMHAPQRKHWEVPVLPKPIAPPPPPPLPRQRRHWEMSATSAIVDQPRSILKPPVLAPPSRPFVLQNQTTNESLGEIEESSKLKLKPLHWDKVRTSSDREMAWDQMNSMSFKLNEEMIETLFVVNTSNQKPKDTTPRSVLPLPNQENRVLDPKKSQNIAILLKALNVTIEEVCEALLDGSSDTLGAELLESLLKMAPTKEEERKLKEHKDDSPTKLDVAENFLKAMLDIPFAFKRVEAMLYMVNFQSEIEYLRKSFQTLEVACEELRSCRMFLKLLEAVLKTGNRMNVGTNRGDAEAYKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLSSTNQTTNSTLTEDVKCRRLGLQVVSNLSSELSNVKRAATMDSELLSSDVSKLSKGATNIAEIVKLIEKAGLDETSKKFTESMNNFVKMAEDEIMKIQAQESVAMTLVKEVTEYFHGNLSKEEAHPFRIFLVVRDFIAVLDRVCKEVGMINERTTVSSAHKFPVPVNPMLPQPLPGLHDRKHCSSNSSDDESTSSP 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi333g00041 1015 MobiDBLite consensus disorder prediction 41 60 - -
Vivi333g00041 1015 ProSiteProfiles Formin homology-2 (FH2) domain profile. 560 985 IPR015425 -
Vivi333g00041 1015 MobiDBLite consensus disorder prediction 986 1015 - -
Vivi333g00041 1015 MobiDBLite consensus disorder prediction 233 249 - -
Vivi333g00041 1015 Pfam Formin Homology 2 Domain 565 959 IPR015425 -
Vivi333g00041 1015 MobiDBLite consensus disorder prediction 61 94 - -
Vivi333g00041 1015 SUPERFAMILY Formin homology 2 domain (FH2 domain) 507 971 - -
Vivi333g00041 1015 MobiDBLite consensus disorder prediction 212 425 - -
Vivi333g00041 1015 MobiDBLite consensus disorder prediction 357 371 - -
Vivi333g00041 1015 MobiDBLite consensus disorder prediction 291 356 - -
Vivi333g00041 1015 MobiDBLite consensus disorder prediction 372 424 - -
Vivi333g00041 1015 SMART it6_source 560 974 IPR015425 -
Vivi333g00041 1015 MobiDBLite consensus disorder prediction 41 97 - -
Vivi333g00041 1015 MobiDBLite consensus disorder prediction 613 627 - -
Vivi333g00041 1015 PANTHER FORMIN-RELATED 349 1006 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi333g00041 1015 MobiDBLite consensus disorder prediction 613 632 - -
Vivi333g00041 1015 Gene3D Formin, FH2 domain 566 980 IPR042201 -
Vivi333g00041 1015 MobiDBLite consensus disorder prediction 267 281 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi333g00041 526 1001 FH2 protein (formin) Gene Family AT3G25500 70.204 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi333g00041 - - gmx:100801837 984.171