Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi333g00033 ATGGAGGAATCGTTGGAGAATCTTATTTCTTATATGGAAATGGAAGATGAAGTGATGGATCAAAGCAGTAACACATTTAATGAGCAAGAGTTTCTCAAAGATATCATTCTTGAAGAACCAGAATGTGAACCTTTTTCTTATCTTTGTTCCAATGAAATCCAACACAACAGTTCCATTTCTGCAGGAAATATTAACATTGAAGTTGGTGTCACTAGTCCCACAAATAGTATTTTGTCCTTTGATCATGATATTGAAGCAATCCACAAAAGTTATAGTTCAAACTCTATAATTTCTTTGGAAAGATCGTGTGTTAACGTTGGTTCTCCAGCTACATACCTTTTATCTTTTGATAATTCAAGTGTTGAACCGATTGTTGAACCAATGTCAAATAAAAGAAGGAGTGTGAAGAAAGATGAAAGAAAGGTGAAGGAAGCAACAAAGAGGGTTAGAAGGTCTTGTGAGACTGTGCAAGATCATTTGATGGCTGAGAGGAAAAGGAGAAGGGAGTTGACTGAGAGTATTATAACTCTTTCAGCTATGATTCCTGGCTTGAAAAAGATGGACAAGTGCTATGTACTTAGTGAAGCTGTGAATTACACAAAACAGCTTCAAAAACGGATTAAGGAGTTGGAGAATAATCAAAACAAAGATAACATAGTGATTAATCCAGCAATATTCAAGTGGAAATCTCAAGCTTCATCAAACAAAAGGAAGTACTCAGAATCACTACTTGAGGTTGAAGCTAGAATGATGAAAAAGGAAGTACTTGTTAGAATTCATTGTGAGAAGAAAAAGGACATAGTGCTCAAAATACATGAGTTGCTTGAAAATTTCAATCTCACTATAACCAGTAGTAGTGTATTGCCATTTGGTGCTTCAGTTCTTGTAATTAACATTTTTGCTCAGATGGATGAAGAAGACAGCATAAGCATGGATGAGCTTGTGAAAAATCTGAAAAAATATCTGTTGGAGGTATGTGGGAATCAATAA 990 0.3505 MEESLENLISYMEMEDEVMDQSSNTFNEQEFLKDIILEEPECEPFSYLCSNEIQHNSSISAGNINIEVGVTSPTNSILSFDHDIEAIHKSYSSNSIISLERSCVNVGSPATYLLSFDNSSVEPIVEPMSNKRRSVKKDERKVKEATKRVRRSCETVQDHLMAERKRRRELTESIITLSAMIPGLKKMDKCYVLSEAVNYTKQLQKRIKELENNQNKDNIVINPAIFKWKSQASSNKRKYSESLLEVEARMMKKEVLVRIHCEKKKDIVLKIHELLENFNLTITSSSVLPFGASVLVINIFAQMDEEDSISMDELVKNLKKYLLEVCGNQ 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi333g00033 329 PANTHER BHLH TRANSCRIPTION FACTOR 13 322 - -
Vivi333g00033 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 214 IPR036638 GO:0046983
Vivi333g00033 329 SMART finulus 160 209 IPR011598 GO:0046983
Vivi333g00033 329 Coils Coil 128 148 - -
Vivi333g00033 329 Coils Coil 193 213 - -
Vivi333g00033 329 Gene3D - 162 252 IPR036638 GO:0046983
Vivi333g00033 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 203 IPR011598 GO:0046983
Vivi333g00033 329 Pfam Helix-loop-helix DNA-binding domain 158 204 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi333g00033 150 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 36.041 2.93e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi333g00033 HLH 7.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi333g00033 - - tpra:123888201 452.981