Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi333g00017 ATGGATAATGGTGAAGATGCTAATGAGAGGAACAATGGTAGTTATGTGGATAATGAAGAAGGAAAAGATGATTTGGATGATTACAAAGATATAGGTGAAATCTCAGATGATGATATAAGAGATATGAAATTTGAATCAGAGAAAAAAGCTTGTGAGTTTTATGAAACATATGCAGAATATCATGGGTTTGCTGTAAGAAGAGATGAGATTGACCGTGATTTCAAAAAAAATATTGTTATGCGCCAATTAGTTTGTAATAGAGAGGGGAAAAGACATAAAAAACATATGTTAAGGGTGGATCGACATAGGGGGCCAAGGCCAATCACTCGAACAGGTTGTCTTGCTCGGTTGCGTGTGGCATATGATGTAGTGAGTAGAGGTTGGAGAGTTGTTGCATTTGAATCCGCTCATAATCATAAGTTAACTCCACAGCGGTTTGTCCATTTTATTCCTAAGTATCGTCGACTGAGTGAAGCTGATAAAGCGCTTGTTGATGGCTTGCATACATGTGGTGTTAGAACATGTCATATTTTGGGTTTTATGTTGGGTCAGAAAGGTGGTCATGAAGATTTGGGATTTATCAAGAAGGACCTATATAATTATTTTAGTAATGGAGCCAAGGTTAAAAGAGAAAATGGAGATGCTTTTGCTGCTTTGTCTTATTTACAGGCTAAAGCCGACAATGATCCGATGTTTTTTTCGAAGTTTACCACAACAGAGGATGGTCGTCTACAAAATTTATTTTGGTCAGATGGAACTAGCCGATTTGACTTTGAATGTTTTGGTGATGTGGTTGCATTTGACACGACCTATAAAAAGAACAGGTACAACAAACCTTTTGTTATTTTTTGTGGGTACAATCATCATGGTGAAACTACAATTTTTGGGTGTGCTTTAATTTCGGACGAAAAGACAGAGACATATAAGTGGGTTTTAAATGCCTTTTCTGAAGCAATGTTCCATAAAAGTCCAAATGTATTTGTTACTGACGGAGATGGTGCGATGCGGGAAGCTATTAGAGTTGAATTTCCAAATGCGTCACATCGCCTCTGTTTATGGCATTTACATCAAAATGCTATTGAGAATGTCAAGAATACAAAGTTCCTAGAAGAGTTTAAGTCATTGATATATGCTAACTATACCCCTGAGACATTTGAAGATGAGTGGAAGAGGATTATTGATGATAATGGTCTATCAGAGAACAAATGGGTTAAGAAAACTTATGAGATAAAGAAAATGTGGTCGAGTGCGTACATGCGAGACACACCTTTTTGTGGTATAAGAACTACATCAATGTGTGAAGGTATCAATTCATTTATCCAGGGGTATGTGGACAATAAAAACAGTCTTGTGGATTTCATGCATAATTTTGAAAGAGCTTTGAAAGAATACAGACATAACGAATTATTATCTGATTTTAAGTCGTTCTATTATGAACCCGTGTTGACAAGTGCTTTAGAAGGAATTGAGACTGGAGCATCAGAGATATTTACATGTAAAAAATTTAGGGATGTTAAAAATGAGATAGAAGGTGCAGCTGCATTGAATATCATTGAAAGAATTGAGACCGGTAATAACGTGACATTGAAGATGAATAGATTTTGCAATCCAAATTCTGAATTTTCAGTTTGTCTCGAGAGGACGGAGAGTGTATTTTTATGTGATTGTCGACTGTTTGAACGTTTAGGAATTCCGTGCTCTCACATTATTTGTGCCATGAGGCATGAGCATATGAATGTGTTTCCAAAAAGTTTGATTTGTAAGAGATGGACTAAATCAGCCAAGGATGATCACATTTCGTCGGTGTTTTCTGAAGAAAGTGAATCTGAAAAGTTGTTCATGTTTCGTAGAGGCGCAATGTTTGCTGCATTCAACACTTTGTGTGATGTTTCTTGTAAAGATTCTGGTTCCTATAAAGAAGCTCTAGAAGGAATTTACAAATTGTGTGAAAATATAAAGAAGCATTTGGAAGTAAATGATAAACGTAAATCTAATCCGTCGGTTATTGGTGATCCTGTAGAGGCCAAGACAAAAGGTGCCCCTCATAAGAAAAGAAAATCGTGGAAGACAAAAGGTGCTATCCGTAAAGGAAAAAATTCATGGAAATCAAGACAATGTTCTCATTGTAAACTACCTGATCACACAAAACGGAAGTGTCCAGTACTAGCTGCACGTGATGATTTACATCAGGTTGACGATAAGGTTTCATCCGACCAATCAATGAATTTTAATATGTCCATAAGTCATAATATCAATGACGACATAGACTCCCTAAAAGTCTCAAATAAAAACAAGGTTGTAGATAGCACTCGCGGTAGTAAACAAAAAGGAAAAGGTGTCAATGTTGCTTTTACAACAAAAGACTCTATCAATAAAATAACTTCAAAACAAATTGACAAAGAAAAATCTATTGGACCAAAGGTAAACATGGCGGATAAAAATGAAAAAGTCAGTCCAACTGTAAGTGCTTTTGTCACTCAGAGTAACGCATTTAATACTGAAAGTAATGTTATGGGACATGACTCTGTCTTTGGCAACTCTAATGTCAAAATGGGAAGTTTTAATGCAACATGGAACAATGGCGTGGGATATGGTGCTCATTATAATGGGGTTCCGAATCAAAATGTATCAATTTTTCCCCAGTTTGTTCCTAATCAAGGTGCATTGATTTGCCCCCAATTTGTTCCGAGTCAAAGTGCGTCGTTTTTTCCCCAATTCGTTCCAAATCAAAGGGCATCAATTTTCCCTCAATTTCCATCAGTAGACAACTTCACAACACATTCAAATTCTTCTTTATATAACAGAGGACATAATATTCCTCACAATACACATTTTATGGGCACGTTGAAGGAGATGGAACATTCTGCAAAATTGACTAAAAACAAAGATGAAAATGAAGATTCTAAACATGAAAAGCACAACCGGTGA 2928 0.3627 MDNGEDANERNNGSYVDNEEGKDDLDDYKDIGEISDDDIRDMKFESEKKACEFYETYAEYHGFAVRRDEIDRDFKKNIVMRQLVCNREGKRHKKHMLRVDRHRGPRPITRTGCLARLRVAYDVVSRGWRVVAFESAHNHKLTPQRFVHFIPKYRRLSEADKALVDGLHTCGVRTCHILGFMLGQKGGHEDLGFIKKDLYNYFSNGAKVKRENGDAFAALSYLQAKADNDPMFFSKFTTTEDGRLQNLFWSDGTSRFDFECFGDVVAFDTTYKKNRYNKPFVIFCGYNHHGETTIFGCALISDEKTETYKWVLNAFSEAMFHKSPNVFVTDGDGAMREAIRVEFPNASHRLCLWHLHQNAIENVKNTKFLEEFKSLIYANYTPETFEDEWKRIIDDNGLSENKWVKKTYEIKKMWSSAYMRDTPFCGIRTTSMCEGINSFIQGYVDNKNSLVDFMHNFERALKEYRHNELLSDFKSFYYEPVLTSALEGIETGASEIFTCKKFRDVKNEIEGAAALNIIERIETGNNVTLKMNRFCNPNSEFSVCLERTESVFLCDCRLFERLGIPCSHIICAMRHEHMNVFPKSLICKRWTKSAKDDHISSVFSEESESEKLFMFRRGAMFAAFNTLCDVSCKDSGSYKEALEGIYKLCENIKKHLEVNDKRKSNPSVIGDPVEAKTKGAPHKKRKSWKTKGAIRKGKNSWKSRQCSHCKLPDHTKRKCPVLAARDDLHQVDDKVSSDQSMNFNMSISHNINDDIDSLKVSNKNKVVDSTRGSKQKGKGVNVAFTTKDSINKITSKQIDKEKSIGPKVNMADKNEKVSPTVSAFVTQSNAFNTESNVMGHDSVFGNSNVKMGSFNATWNNGVGYGAHYNGVPNQNVSIFPQFVPNQGALICPQFVPSQSASFFPQFVPNQRASIFPQFPSVDNFTTHSNSSLYNRGHNIPHNTHFMGTLKEMEHSAKLTKNKDENEDSKHEKHNR 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi333g00017 975 MobiDBLite consensus disorder prediction 662 694 - -
Vivi333g00017 975 MobiDBLite consensus disorder prediction 1 31 - -
Vivi333g00017 975 MobiDBLite consensus disorder prediction 954 975 - -
Vivi333g00017 975 Pfam MULE transposase domain 264 358 IPR018289 -
Vivi333g00017 975 Pfam FAR1 DNA-binding domain 52 142 IPR004330 -
Vivi333g00017 975 MobiDBLite consensus disorder prediction 679 694 - -
Vivi333g00017 975 PANTHER OS01G0519700 PROTEIN 39 597 - -
Vivi333g00017 975 SMART 26again6 552 579 IPR006564 GO:0008270
Vivi333g00017 975 ProSiteProfiles Zinc finger SWIM-type profile. 541 577 IPR007527 GO:0008270
Vivi333g00017 975 MobiDBLite consensus disorder prediction 1 19 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi333g00017 MULE 2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi333g00017 - - vvo:131629359 2008.42