Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi333g00011 ATGGCTTCTATGAACTTGTTAGGTTTTTCTCTCTCACCACAAGAACAACACCCATCTTCTACTCAAGATCAAACGGTGGTGCCTTCTCTTTTTGGTTTCAACCCTCACGATGATGGTTCTGGTGTTCAACAAGGAGATCACTGCTTTGATCTCACTTCTCACTCATCAACTCCTCACCATCTTTCTCATCCTTTTTCCATTTATGATGCTTTCCACACCAATAACAGCATTCATACCACTCAAGATTGGAAAGAGAACTATAACAACCAAACTCTACTATTGGGAGGTTCATGCATTAACCAAAATGGGAATAATAGTCATCAACAGGTGCAACCGAAGCTAGAGAACTTCCTTGGTGGAAACTCTTTCACCGATCATCAGAATGAATACGGTGGCAACAACAACAACTCTTACTCATCGTTACACCTTCCGGTTACTCAGCCGGAACAATCTTGTGGTGGCGGCGGTGATGGTGGTGGTGATGATAACTCAAATAACAACAATAATAACTCCATAGGTTTATCCATGATAAAAACATGGCTGAGAAACCAACCACCCCCAGAAAACAACACCAACAACAACAATGAAAATGGAGCAGCACGTGTGCAGACACTATCACTCTCCATGAGTACAGGTTCACAGTCAAGCTCATCGGTGCCTCTTCTCAATGCAAACACAACGAACGGTGAGATTTCATCGTCGGAAAACAAACATCCACCCACAACTGCTGTAGTACTTGATAGCAACCAAACTGGTGCTATAGTTGAAACTGTCGCGCCTAGGAAATCCATTGATACATTCGGACAAAGAACTTCCATTTACCGCGGTGTAACAAGGCATAGATGGACCGGAAGATATGAAGCTCATCTTTGGGATAACAGTTGCAGAAGGGAGGGACAAACTCGCAAAGGAAGACAAGTTTACTTAGGAGGATATGACAAAGAAGAAAAAGCAGCTAGAGCCTATGATTTAGCAGCACTAAAATACTGGGGAACAACTACAACAACAAATTTTCCTATAAGCCATTATGAAAAAGAGTTGGAAGAAATGAAGCACATGACAAGGCAAGAGTATGTTGCGTCATTGAGAAGGAAAAGTAGTGGTTTTTCACGCGGTGCATCCATTTACCGAGGAGTAACTAGACATCATCAACATGGTAGATGGCAAGCAAGGATTGGAAGAGTTGCAGGCAACAAAGATCTCTACCTAGGAACTTTCAGCACTCAAGAAGAGGCAGCAGAGGCATATGATGTAGCAGCCATAAAATTCAGAGGACTTAGTGCTGTTACGAATTTCGACATGAGCCGATATGATGTGAAAACCATACTCGAGAGCAGCACTTTACCGATCGGTGGTGCTGCAAAGCGTTTGAAAGATATGGAGCAAGTTGAATTATTGAGTGTGAATGTGGTGGATAATATCGGCCATAGTAGAGCCGAACAAGATCATCATGGAATCATCAATAATACTACTAATTCCCTTTTAACAGATCAAGCCATGAATAACTATGCAGCTGCTAACTGGCATGCTCTTTCATTCCAACAACAACACCCTTACAATACCAACATGCAGTTACAGCATTATCCTTATGGATCACAAACTCAAACTCAGAAGCTTTGGTGCAAACAAGAACAAGATTCTGATGATCATAATACTTATACTACTACTGATCATATTCATCATCAACAGCTACAGCTAGGGAATAATAACAATAACAATAACACTCACAATTTCTTTGGTTTGCAAAATATCATGAGTATGGATTCTGCTTCCATGGATAATAGTTCTGGTTCAAATTCTGTTGTTTATGGTGGTGGAGATCATGGTGGCTATGGAGGAAATAATGGATATATGATTCCAATGGCTACTACTACTGTTATTGGAAATGATGGCAGTAACCAAAACCAAAATCAAAGAAGCAGCAACAACAGTTTTGGTGATAGTGATCAGATAAAGGGATTTGGTTATGAGAATATTTTTGGAGCTACTGATCCTTATCATGCACATGCAAGGAATTTGTACTATCAGCAGCAACAGTTATCTGTTGATGAAGGATCAAATTGCAATAACAACAATAATTGGGTTCCAACTGCAATTCCAACACTTGCACCAAGGACTACTACCAGTGTGTCTCTTTGTCCACCTTTCACTTTGTTGCATGAATAG 2166 0.4063 MASMNLLGFSLSPQEQHPSSTQDQTVVPSLFGFNPHDDGSGVQQGDHCFDLTSHSSTPHHLSHPFSIYDAFHTNNSIHTTQDWKENYNNQTLLLGGSCINQNGNNSHQQVQPKLENFLGGNSFTDHQNEYGGNNNNSYSSLHLPVTQPEQSCGGGGDGGGDDNSNNNNNNSIGLSMIKTWLRNQPPPENNTNNNNENGAARVQTLSLSMSTGSQSSSSVPLLNANTTNGEISSSENKHPPTTAVVLDSNQTGAIVETVAPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKELEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLSAVTNFDMSRYDVKTILESSTLPIGGAAKRLKDMEQVELLSVNVVDNIGHSRAEQDHHGIINNTTNSLLTDQAMNNYAAANWHALSFQQQHPYNTNMQLQHYPYGSQTQTQKLWCKQEQDSDDHNTYTTTDHIHHQQLQLGNNNNNNNTHNFFGLQNIMSMDSASMDNSSGSNSVVYGGGDHGGYGGNNGYMIPMATTTVIGNDGSNQNQNQRSSNNSFGDSDQIKGFGYENIFGATDPYHAHARNLYYQQQQLSVDEGSNCNNNNNWVPTAIPTLAPRTTTSVSLCPPFTLLHE 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi333g00011 721 ProSiteProfiles AP2/ERF domain profile. 375 433 IPR001471 GO:0003700|GO:0006355
Vivi333g00011 721 SUPERFAMILY DNA-binding domain 272 341 IPR016177 GO:0003677
Vivi333g00011 721 FunFam AP2-like ethylene-responsive transcription factor 374 435 - -
Vivi333g00011 721 ProSiteProfiles AP2/ERF domain profile. 273 339 IPR001471 GO:0003700|GO:0006355
Vivi333g00011 721 MobiDBLite consensus disorder prediction 627 648 - -
Vivi333g00011 721 Pfam AP2 domain 273 331 IPR001471 GO:0003700|GO:0006355
Vivi333g00011 721 Pfam AP2 domain 375 425 IPR001471 GO:0003700|GO:0006355
Vivi333g00011 721 MobiDBLite consensus disorder prediction 207 239 - -
Vivi333g00011 721 MobiDBLite consensus disorder prediction 124 147 - -
Vivi333g00011 721 Gene3D AP2/ERF domain 273 341 IPR036955 GO:0003700|GO:0006355
Vivi333g00011 721 Gene3D AP2/ERF domain 375 435 IPR036955 GO:0003700|GO:0006355
Vivi333g00011 721 FunFam AP2-like ethylene-responsive transcription factor ANT 272 341 - -
Vivi333g00011 721 SMART rav1_2 375 439 IPR001471 GO:0003700|GO:0006355
Vivi333g00011 721 SMART rav1_2 273 345 IPR001471 GO:0003700|GO:0006355
Vivi333g00011 721 MobiDBLite consensus disorder prediction 124 172 - -
Vivi333g00011 721 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 105 524 - -
Vivi333g00011 721 CDD AP2 374 435 IPR001471 GO:0003700|GO:0006355
Vivi333g00011 721 MobiDBLite consensus disorder prediction 1 23 - -
Vivi333g00011 721 PRINTS Ethylene responsive element binding protein signature 415 435 IPR001471 GO:0003700|GO:0006355
Vivi333g00011 721 PRINTS Ethylene responsive element binding protein signature 274 285 IPR001471 GO:0003700|GO:0006355
Vivi333g00011 721 SUPERFAMILY DNA-binding domain 374 435 IPR016177 GO:0003677
Vivi333g00011 721 CDD AP2 272 341 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi333g00011 171 460 AP2-EREBP Transcription Factor Family AT5G17430 72.069 4.74e-136 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Vivi333g00011 AP2 1.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi333g00011 K09285 - gmx:100797584 795.808