Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi32g00018 ATGGTTAGGAAGAGGAGAACTGATGGACCAGGTGGTGAAAGCTCTGATGGTCAACACCCTGTGGAGAGGAGTGTTCCCCCTCAACAACAGGCTGCTGTATCTGGAGGTGCAGGACCCCAAGGAGGGCGAGGTCTCCCTCAACAACAGGCTGCTGTATCTGGAGGTGCAGGACCCCAAGGAGGGCGAAGCTGGGGTCCCCCTCAACAACAGGCTGCTGTATCTGGAGGTGCAGGACCCCAAGGAGGGCGAGGCTGGGGTCCCCAAGGTGGACGTGGGGGTTATGAAGGTGGGCGCGGTGGTCATGGGTTGCCCCAACAACAATATGGTGCCCCTCCTGAGCATCAAGGAAGAGGTAGGGGAGGACATCCTCAGCCCCAACAGCAGTATGGTGCTCCCTCTGATTATCAAGGAAGGGGTAGGGGAGGACAGCCACTGCCCCAACAGCAGTATGGTGCTCCCTCTGATTATCAAGGAAGGGGTAGGGGAGGACAGCCACTGCCCCAACAGCAGTATGGTGGACCACCTGAGTATCAAGGAAGGGGTAGGGGAGGACCTCCCCAACCCCAACAGCAGTATGGTGGCCCACCTGAATATCAAGGCAGAGGCAGGGGAGGGCCTTCTCAGCAAGGACGTGGATATAGCGGTGGCCGAGGTGGATATGGTGGCGGTGTGGGCCCTGGTGGTGGCCATGATTCAGTTCCTTCTTATGGAGGCCCCCCTAGGCCACAAGCACCCGAGCTGCACCAAGCTACCTCAGTTCCTTCTGTGCCATATCCAGTTGTGGTGTCTCCTCCACCTGCACCGAGTGAGGCAAGTTCATCTTCACATCCACCAGAAATGTCTGATGTGGAACAAGATCTGGGACAGATGAAAATTCATTCTGAAGAGACTCCCGCTCCTCCGCCTGCAAGCAAATCATCAGTGAGGTTTCCCCTTCGACCTGGAAAAGGGAGCTATGGCAAGAAATGTGTTGTTAGGGCGAACCACTTTTTTGCTGAGTTGCCAAATAAAGACTTGCATCAGTATGATGTGGCAATAACTCCAGAAGTGACTTCTAGAGGTGTAAACCGCGCTGTTATGGCACAGCTTGTAAGATTGTATCGGGATTCTCACCTGGGAAAGAGACTTCCGGCTTATGATGGCCGTAAGAGCCTCTATACTGCAGGGCCACTTCCTTTTATTTCGAAGGACTTTAGAATCACCCTGGTTGATGAAGATGATGGGTCAGGAGGGAAGAGGAGGGACAGGGAGTTTAAGGTTGTTATTAAATTTGCTGCACGTGCTGACCTTCACCACCTGGGTCTCTTTTTGGATGGGAAGCAAGCTGATGCACCTCAGGAAGCTCTGCAGGTTCTTGACATTGTTCTCCGGGAGCTTCCTACTTCCAGGTATTGTCCAGTGGGAAGATCATTTTATTCCCCTCATCTAGGTAGAAGGCAGCCTTTAGGTGATGGGTTGGAAAGTTGGCGTGGATTTTATCAAAGTATTCGTCCTACTCAAATGGGACTGTCTCTGAACATTGATATGTCTTCAACTGCATTTTTTGAGCCACTGCCTGTGATAGAGTTCGTTTGCCAATTGCTGAATAGGGAAGTCTCATCCAGGCCTCTGTCTGATGCTGATCGGGTTAAGATAAAAAAAGCACTGCGTGGTATCAAAGTTGAAGTAACACATCGTGGCAACATGAAGAGAAAATATCGTATTGCTGGTTTGACGTCACAAGCTACGAGAGAGCTGACATTCCCTGTGGATGAGAAGGGGACTATGAAGTCTGTTGTACAGTATTTCTCTGAGACATATGGTTTTGTCATTCAACATGCTTACTTGCCTTGTTTGCAAGTGGGCAACCCTCAGAGACCAAACTACCTTCCAATGGAGGTCTGCAAAATTGCCGAGGGGCAAAGGTACTCTAAACGATTGAATGAGCGACAAATTACCGCCTTGCTCAAAGTCACGTGCCAACGTCCACAAGATAGGGAACGTGACATCTCGCAGACAGTACATCATAATGCCTATCATGAAGATCCTTATGCTAAAGAGTTTGGAATCAAAATCAGTGATAAGCTCGCTCAAGTGGAAGCTCGCATCCTTCCTCCGCCATGGCTCAAATATCATGATACGGGTAAAGAAAAGGATTGTCTACCCCAAGTTGGACAATGGAATATGATGAATAAGAAAATGGTTGATGGGGGGACAGTTAACAATTGGTTCTGCGTAAACTTTTCTAGGGGCGTGCAAGAAAGTACTGCACGTGGCTTTTGCACTGAACTTGCCAGGATGTGTTGCATATCTGGCATGGCATTTAAACTTGAACCAGTAGTTCCTCTACTTAGTGGTCGTCCTGACCAAGTAGAGAAGGTTCTCCAAACGCGTTATCATGATGTCAAGACCAAGCTGCAGGGAAAGGAGCCCGACTTGCTCATTGTCATTTTGCCTGATAATAATGGTTCTCTTTATGGTGACCTCAAGCGTATTTGTGAGACTGACCTGGGGGTTGTTTCCCAGTGTTGTCTAACTAAAAATGTTTTTAAGATGAGCAAACAGTACCTTGCAAATGTTTCATTGAAAATTAATGTTAAAGTTGGGGGTAGGAATACTGTGCTTGTTGATGCACTTTCACGACGCATTCCTCTAGTCAGTGACAGACCCACTATCATTTTTGGAGCTGATGTGACTCATCCTCACCCTGGCGAGGATTCAAGTCCATCAATAGCAGCTGTCGTTGCTTCTCAAGATTGGCCAGAAATCACCAAGTATGCTGGTTTGGTTTGTGCCCAAGCACATCGGCAAGAATTGATTCAAGATCTTTTCAAACAATGGCAAGATCCAGTTAGAGGAACAGTGACTGGTGGAATGATCAAGGAACTTCTTATATCATTCCGGAGAGCAACTGGTCAAAAACCCCAGCGCATCATATTTTACAGAGATGGAGTTAGCGAAGGGCAATTTTACCAAGTCCTGCTATTTGAGCTTGATGCAATCCGGAAGGCTTGTGCTTCACTTGAACCCAACTATCAGCCTCCTGTGACTTTTGTGGTGGTTCAAAAACGTCATCATACTAGGCTCTTTGCCAATGACCACCGTGACAAGAGTTCTGTGGATCGCAGTGGCAATATATTACCTGGAACTGTTGTGGATTCTAAGATCTGCCATCCGACTGAGTTTGACTTTTATCTTTGCAGTCATGCCGGAATACAGGGTACTAGTCGTCCAGCTCATTATCATGTTTTATGGGATGAAAATAAGTTCACTGCTGATGATTTGCAACGTCTAAGTAATAACTTGTGCTACACATACGCCCGATGCACCCGTTCTGTTTCGATTGTGCCCCCTGCTTATTATGCTCATTTGGCTGCATTCCGAGCAAGGTTCTATATGGAACCTGGAACTTCTGATAGCGGATCTATGGCAAGCGGAGCGGTTTCTCGTGGTGGAACGGCAGCTGCCGCTGGTCGTAGTTCACGTGCACCGGGTGCAAATGCTGCTGTTAGACCTCTGCCTGCATTGAAGGAGAATGTCAAGAGGGTCATGTTTTATTGCTGA 3543 0.4838 MVRKRRTDGPGGESSDGQHPVERSVPPQQQAAVSGGAGPQGGRGLPQQQAAVSGGAGPQGGRSWGPPQQQAAVSGGAGPQGGRGWGPQGGRGGYEGGRGGHGLPQQQYGAPPEHQGRGRGGHPQPQQQYGAPSDYQGRGRGGQPLPQQQYGAPSDYQGRGRGGQPLPQQQYGGPPEYQGRGRGGPPQPQQQYGGPPEYQGRGRGGPSQQGRGYSGGRGGYGGGVGPGGGHDSVPSYGGPPRPQAPELHQATSVPSVPYPVVVSPPPAPSEASSSSHPPEMSDVEQDLGQMKIHSEETPAPPPASKSSVRFPLRPGKGSYGKKCVVRANHFFAELPNKDLHQYDVAITPEVTSRGVNRAVMAQLVRLYRDSHLGKRLPAYDGRKSLYTAGPLPFISKDFRITLVDEDDGSGGKRRDREFKVVIKFAARADLHHLGLFLDGKQADAPQEALQVLDIVLRELPTSRYCPVGRSFYSPHLGRRQPLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFFEPLPVIEFVCQLLNREVSSRPLSDADRVKIKKALRGIKVEVTHRGNMKRKYRIAGLTSQATRELTFPVDEKGTMKSVVQYFSETYGFVIQHAYLPCLQVGNPQRPNYLPMEVCKIAEGQRYSKRLNERQITALLKVTCQRPQDRERDISQTVHHNAYHEDPYAKEFGIKISDKLAQVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNKKMVDGGTVNNWFCVNFSRGVQESTARGFCTELARMCCISGMAFKLEPVVPLLSGRPDQVEKVLQTRYHDVKTKLQGKEPDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKNVFKMSKQYLANVSLKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPVRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANDHRDKSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADDLQRLSNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPGTSDSGSMASGAVSRGGTAAAAGRSSRAPGANAAVRPLPALKENVKRVMFYC 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi32g00018 1180 Pfam PAZ domain 526 647 IPR003100 GO:0005515
Vivi32g00018 1180 SUPERFAMILY Ribonuclease H-like 793 1127 IPR012337 -
Vivi32g00018 1180 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 298 1127 - -
Vivi32g00018 1180 ProSiteProfiles PAZ domain profile. 518 632 IPR003100 GO:0005515
Vivi32g00018 1180 SMART DUF1785_2 465 517 IPR014811 -
Vivi32g00018 1180 Pfam Argonaute linker 1 domain 466 515 IPR014811 -
Vivi32g00018 1180 FunFam protein argonaute 10-like 875 1180 - -
Vivi32g00018 1180 Gene3D paz domain 511 636 - -
Vivi32g00018 1180 CDD Piwi_ago-like 676 1126 IPR045246 -
Vivi32g00018 1180 Gene3D - 696 869 - -
Vivi32g00018 1180 MobiDBLite consensus disorder prediction 1 284 - -
Vivi32g00018 1180 FunFam Protein argonaute-2 511 637 - -
Vivi32g00018 1180 Gene3D - 875 1180 IPR036397 GO:0003676
Vivi32g00018 1180 SMART PAZ_2_a_3 522 654 IPR003100 GO:0005515
Vivi32g00018 1180 MobiDBLite consensus disorder prediction 21 35 - -
Vivi32g00018 1180 MobiDBLite consensus disorder prediction 258 272 - -
Vivi32g00018 1180 Pfam Piwi domain 807 1126 IPR003165 GO:0003676
Vivi32g00018 1180 Pfam Argonaute linker 2 domain 658 704 IPR032472 -
Vivi32g00018 1180 MobiDBLite consensus disorder prediction 293 312 - -
Vivi32g00018 1180 Pfam Mid domain of argonaute 715 790 IPR032473 -
Vivi32g00018 1180 SMART Piwi_a_2 806 1127 IPR003165 GO:0003676
Vivi32g00018 1180 CDD PAZ_argonaute_like 517 631 - -
Vivi32g00018 1180 Pfam N-terminal domain of argonaute 321 456 IPR032474 -
Vivi32g00018 1180 Pfam Glycine-rich region of argonaut 193 298 IPR024357 -
Vivi32g00018 1180 SUPERFAMILY PAZ domain 325 671 IPR036085 GO:0005515
Vivi32g00018 1180 ProSiteProfiles Piwi domain profile. 806 1127 IPR003165 GO:0003676
Vivi32g00018 1180 FunFam Argonaute 10 696 869 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi32g00018 197 1180 Eukaryotic Initiation Factors Gene Family AT1G48410 78.182 0.0 1574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi32g00018 K11593 - gmx:100780375 1672.52