Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi32g00008 ATGATACTTTACCTTGCTACCATTTGTCTCAATCTCACATCTAACCAATGCACAATGCAAGAGCCTCTCCTCACTCTTTTCTCCACTAATGGAGAAACACATTCACCAAGTATACCATTACTCATGGAACAATCTTTCCATGATCTTGCTCCATCCCCATCTCTTCATCAATCATCTTCCCATATCATCAATGAAGCCAGACACCCTTCTTTTATTAACCTCATAGCCAACTTGAGCATCACGAAAGCGAAGATCATTCACCGCTCTCGTTCTGCTCCGTCCATTTTATTCACTCACACGAAGGTAGATTTTCACGAGTCCTTTGAACATATACATGCATATAAGTCGTCGACTTTACTCGCGAGGCTGTGTTTCATTATCGTTTTGTTGTATGTGGCTGTTGGTGTAACGGTGTACATGATAAGTGGGAGTTTCAAGGGAACTACTACTTTCGGACCGGTAGATGCTGTGTATTTTACAGTGGTAACTCTATCCACTATTGGATATGGAGATATTGTTCCTGATTCCATATTTACAAAGATGTTTACATGCGGTTTCATTTTGGTTGGTTTTGGATTCATCGGTTTTATGCTTAATGAGTTAGTCTTATACATTTGCGATACCCACGAGGCGTTCTTATTGAGCATGATGGATGAGAATAGATACAAGAAAATTCTGAGGACTTGCATGGTTGATGAAGAGAAAGGAAGAATGAGGATAAGAACAAAAGTTTGTGTTGCTTCAGTTGTTGTTATCGTCTGTATTGCTATTGGAACGATTACAGCGCATTTTGTTGAGGATCTGAATTGGGCCGACAGTTTTTATCTTTCAATTACTTCTGTTACGACGGTTGGTTATGGAGATTTTTCTTTCAAAACTTTAGCTGGAAGATGTTTTGCGATTCTGTGGCTTTTGGTAAGCACTTTGGCAGTTGCGAGGGCATTTTTATACCTCGCTGATTATAGCTTGCAGAAGAAAAGCCGCGAAATGGCCAAAAGGGTTCTTCAGAAGAAAATAACTTTGTCGGATTTAGCAGCTGCAGATCTTGATAACGATGGATCAATCAGTAAATCTGACTTTGTGATATACAAGCTTAAGCAAATGGGGAAGATTACTGAGATAGATATTCTACAAATTAGCAAACAATTTGATTCCTTGGACCTTGGTATGTACGGCAAGATCACTCTAGCTGGTCTCATGGAAACTGTCTAG 1212 0.396 MILYLATICLNLTSNQCTMQEPLLTLFSTNGETHSPSIPLLMEQSFHDLAPSPSLHQSSSHIINEARHPSFINLIANLSITKAKIIHRSRSAPSILFTHTKVDFHESFEHIHAYKSSTLLARLCFIIVLLYVAVGVTVYMISGSFKGTTTFGPVDAVYFTVVTLSTIGYGDIVPDSIFTKMFTCGFILVGFGFIGFMLNELVLYICDTHEAFLLSMMDENRYKKILRTCMVDEEKGRMRIRTKVCVASVVVIVCIAIGTITAHFVEDLNWADSFYLSITSVTTVGYGDFSFKTLAGRCFAILWLLVSTLAVARAFLYLADYSLQKKSREMAKRVLQKKITLSDLAAADLDNDGSISKSDFVIYKLKQMGKITEIDILQISKQFDSLDLGMYGKITLAGLMETV 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi32g00008 403 Pfam Ion channel 250 320 IPR013099 -
Vivi32g00008 403 Pfam Ion channel 126 203 IPR013099 -
Vivi32g00008 403 Gene3D - 102 204 - -
Vivi32g00008 403 SUPERFAMILY Voltage-gated potassium channels 107 204 - -
Vivi32g00008 403 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 119 174 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vivi32g00008 403 SUPERFAMILY Voltage-gated potassium channels 218 338 - -
Vivi32g00008 403 Gene3D - 205 347 - -
Vivi32g00008 403 PRINTS Two pore domain K+ channel signature 162 190 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vivi32g00008 403 PRINTS Two pore domain K+ channel signature 282 291 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vivi32g00008 403 FunFam Two-pore potassium channel 2-like 222 346 - -
Vivi32g00008 403 ProSitePatterns EF-hand calcium-binding domain. 348 360 IPR018247 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi32g00008 86 401 Ion Channels AT4G18160 48.265 4.56e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi32g00008 K05389 - gmx:100789639 509.99