Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi32g00006 ATGTTTGGTGAAATGGAACACAAGCAAGAACAAGACAGTGGTAACCAGAATAATATGTCGGCTAATGGTATTGATGTTAGTCTTATATCTCCTAAAGTTCCGAAATCGGTTTCGCCAGTTTCTTCTGCAGCCGAGGGGGAAACGTTAAAGCGACCTCGTGGTCGGCCGGCTGGATCGAAAAACAAGCCAAAGCCACCGATCATTGTCACGAGAGATAGTGCAAATGCACTGAAAGCTCATGCTATGGAAGTAAGTTCCGGATGTGATGTGAATGAGAGTTTGTTAAACTTTGCGAGGAGAAAGCAACGTGGTCTTTGTATACTTAATGGCACTGGTTGTGTAACAAATGTAACATTGCGCCAACCGGCTTCGTCTGGTGCAATTGTGACCCTTCATGGTCGATTTGAGATACTCTCGTTGTTGGGGTCGATTCTTCCCCCACCAGCACCGCCGGGAATCACTGGCCTGACGATTTACTTAGCAGGTGCTCAAGGACAAGTTGTTGGAGGTGCTGTGGTCGGTGCTTTGATTGCTTCGGGACCTGTTGTCATCATGGCTGCATCGTTCATGCATGCTACTTTCGATCGTCTGCCACTGGAAGACGATGAACTTGCTGCTGCAATGCAGAACCAGCATTACCAAAATGGACGCACACAACATCATCTTGATATCTCTGACTTATATGCAATGCCACAGAACCTCCTCATGAATGGTGCAATGCCTCCTGAGATATACTCTTGGGCACCAGGGCGAAACTTGTCAAAAACCTGA 771 0.4708 MFGEMEHKQEQDSGNQNNMSANGIDVSLISPKVPKSVSPVSSAAEGETLKRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLCILNGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPVVIMAASFMHATFDRLPLEDDELAAAMQNQHYQNGRTQHHLDISDLYAMPQNLLMNGAMPPEIYSWAPGRNLSKT 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi32g00006 256 PIRSF ESCAROLA 2 250 IPR014476 GO:0003680
Vivi32g00006 256 ProSiteProfiles PPC domain profile profile. 74 212 IPR005175 -
Vivi32g00006 256 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 15 220 IPR014476 GO:0003680
Vivi32g00006 256 MobiDBLite consensus disorder prediction 1 68 - -
Vivi32g00006 256 Pfam Plants and Prokaryotes Conserved (PCC) domain 79 189 IPR005175 -
Vivi32g00006 256 FunFam AT-hook motif nuclear-localized protein 77 218 - -
Vivi32g00006 256 CDD DUF296 80 160 IPR005175 -
Vivi32g00006 256 Gene3D - 76 221 - -
Vivi32g00006 256 SUPERFAMILY AF0104/ALDC/Ptd012-like 74 206 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi32g00006 5 255 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 67.717 1.76e-104 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi32g00006 - - gmx:100804941 398.282