Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi328g00014 ATGCTTTCTTCACCTACGTCTTATATCAAAGGTGGTGTCCCTATAAATGGCCATTTTATAACCTTTTTGCACCGTACACTTGACGAGAAGTACGTGATGGGAATGGAATTGGCCATCAAAACACATTGCAGAAGCATCTCAGCTGAGGAATTTGCTCAGAAAAGAAACTCATGGAGCTTTCTAAACCTAAACCATAACAGTCCAGTTATCAATGATGCTGCTATTAGTTTGGTTTCCAAGCAGGGTCCATGTTGGTCTGAGCTCAAGTTCACGGGTATGGTGCAGTGGGGCCAACGCAGGCAGGTTCGGTTTCTGGGTCGCAATGAGGAACAAAAGGTTGAATCTTTACACCAACATCGTAAGGAAAAAAGGGAAAGGACTTATAATAAGAGAAAGAACGTTGAAGAAGAAATGGAGGCTGTAAAGGTAGCTCCTTTTGGGGTACTGAGGATGACTCGTCAGAGCTTCAAAAATCAACAAGATATTACTAGTAGCAGCGGGGCTAAAAAGTCTAAGAAAGCAGTAAACGACGACACTAAGCAGCAGCAACTCATTGTTTATAGCAAAAAAGGCCGGAAAATATCAATTGACAGATGGTCTGCTGAGAGGTATAAGATGGCAGAGGAGAATATGTTGAAGGTTATGAAGGAAAGGGAAGCTGTGTATGGAAACCCAATAATGAGGCAAGACTTGAGATCAGAAGCACGAAAGTATATCGGTGACACGGGTTTACTTGATCATTTGCTGAAGCATATGGCTGGAAAAGTGGCACCGGGAGGAGTTGAAAGATTCCGACGACGTCACAATGCTGAAGGTTCAATGGAATACTGGTTAGAGAGTGCGGATCTCGTTGATATCAGAAAAGAAATGGGTGTACAAGATCCTTACTGGACTCCTCCACCTGGATGGAAGCCTGGAGACAGCATTTCACCAGAACATGTTACTAGAAATGAACTCAGGGAGATAAGGGAGGAATTAATCAAGTTGAAACGAGATATGCTGGATCTCAAATCAAAAAAAGAAGAGGAAGCCTTGGCCATTGTGGCTACTTCTAGTTCCTGTTTGTCAAGTTTGAACTATAGGGACTATGATTCCCAGGTTTCTATGCAGGAGATTTATGCTGAGCTGGTTCATAAAAAGGCTAGAGTTGAAAAACAGCTAAAAGAAATTACTCTGACTTTGAATAACATGGAGGGCCAACTTGGAATGCTGAAGCCAACAATGGCAGAATCATTAACACCACCAGCGTTATTGCTAGGACCAACATCATCATTGACAGAAAACATTGGAGATGTGACAAGAGAGGATGACAGAGGAACAAAATCAGCGGACACACAAATGGTACGAAGCAGCGCAGCAGAGCAAAAGGCAGCAAAGATAGAAAGACTTAAAAGTGGTTTTAAAATCTGCAAACCAAGAGGGACCTTTATGTGGCCAAATATGAGCATGTCTCCTCATGTTGAGGCTAACCTTGATGAAATCACAGTGGTCCCAACCCCAACCTCAGTTTCCTCTGCTACCACATCAGCCCCCAAGCTTGTCTCCAATTCCAAGACTAAGAACTTGCCACTATCAATACCTTCCCCTTCTTCTGCTGTTAAGCCACTAGCAGAGAAGCGCCCTGTGAGCACAGCTACTTTGACACATGTCACTGGACCCTCTTCCCCTCACCTTTCTCCTCCATTAGAGACAAAATCCACAATTACCAACAAGGATTCTTCTATTAACCTCAATGAGACTCCTCTGGCCCAAGAGTAG 1758 0.4346 MLSSPTSYIKGGVPINGHFITFLHRTLDEKYVMGMELAIKTHCRSISAEEFAQKRNSWSFLNLNHNSPVINDAAISLVSKQGPCWSELKFTGMVQWGQRRQVRFLGRNEEQKVESLHQHRKEKRERTYNKRKNVEEEMEAVKVAPFGVLRMTRQSFKNQQDITSSSGAKKSKKAVNDDTKQQQLIVYSKKGRKISIDRWSAERYKMAEENMLKVMKEREAVYGNPIMRQDLRSEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGSMEYWLESADLVDIRKEMGVQDPYWTPPPGWKPGDSISPEHVTRNELREIREELIKLKRDMLDLKSKKEEEALAIVATSSSCLSSLNYRDYDSQVSMQEIYAELVHKKARVEKQLKEITLTLNNMEGQLGMLKPTMAESLTPPALLLGPTSSLTENIGDVTREDDRGTKSADTQMVRSSAAEQKAAKIERLKSGFKICKPRGTFMWPNMSMSPHVEANLDEITVVPTPTSVSSATTSAPKLVSNSKTKNLPLSIPSPSSAVKPLAEKRPVSTATLTHVTGPSSPHLSPPLETKSTITNKDSSINLNETPLAQE 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi328g00014 585 MobiDBLite consensus disorder prediction 157 179 - -
Vivi328g00014 585 MobiDBLite consensus disorder prediction 544 585 - -
Vivi328g00014 585 MobiDBLite consensus disorder prediction 501 528 - -
Vivi328g00014 585 Coils Coil 373 400 - -
Vivi328g00014 585 Coils Coil 124 144 - -
Vivi328g00014 585 PANTHER PROTEIN DYAD 26 564 IPR044221 GO:0007131|GO:0051177|GO:0051321
Vivi328g00014 585 MobiDBLite consensus disorder prediction 415 455 - -
Vivi328g00014 585 MobiDBLite consensus disorder prediction 501 585 - -
Vivi328g00014 585 Coils Coil 312 339 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi328g00014 194 279 PHD Transcription Factor Family AT5G22260 40.000 1.10e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi328g00014 - - vvo:131593274 952.199