Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi326g00003 ATGGAAAGACATCAATTCCAACACAAAAACCAAAGACAACAACATCAACAACAACAAAATCTTCATCTTATCAATAACACTGCTAACGTTTTTGATGTTTCTGATAGGTTTCCTCAATGGAGCATCCAAGAAACCAAAGAGTTTCTTATGATAAGAGCTGAGCTAGATCAAACTTTCATGGAGACTAAAAGGAACAAACAGTTGTGGGATGTTATCTCTAACCATATGAAGGAAAAGGGTTATCATAGAAGCGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTTGTTACTCGCTATAAGGGATGTGAAACAATGGAGACAGAAATGTTGAAACAACAATTTCCATTTTACAATGAACTTCAAGCAATTTTCACAGCAAGAATGCAGAGAATGCTATGGGCTGAATCCAAAGACGGATCGACGAAGAAAAACGCGACACAGCTTTCAACCGACGACGAGGAAGACGACGGCAACGAAGAAAGTGAGGAAATATCTCAAAAGGGGAGAACTACTAGAAGCAGAAAGATGAAAAAAGCCAAGATAGTTAGCGAAAGCGGTAACGGTACCAGCAGCAGTTTCCACCAGAATTTAAAGGAGATTTTGGATGAGTTCATGAGGCAACAAATACAAGTTGAAGCACAATGGATGGAAGCATTTGAAGCTAGAGAGAATGAGAGGAGGTTGAGGGAGATGGAATGGAGACAACAAATGGAAATGTTGGAGAATGAGAGGTTGTTGATGGAACAAAGATGGAGAGAAAGGGAAGAACAAAGGAGGGTTAGAGAAGAAGCTAGGGCTGACAAAAGGGATGCATTAATCATAGCATTGTTAAATAAGTTAGAAAGAGAATAG 852 0.3955 MERHQFQHKNQRQQHQQQQNLHLINNTANVFDVSDRFPQWSIQETKEFLMIRAELDQTFMETKRNKQLWDVISNHMKEKGYHRSAEQCKCKWKNLVTRYKGCETMETEMLKQQFPFYNELQAIFTARMQRMLWAESKDGSTKKNATQLSTDDEEDDGNEESEEISQKGRTTRSRKMKKAKIVSESGNGTSSSFHQNLKEILDEFMRQQIQVEAQWMEAFEARENERRLREMEWRQQMEMLENERLLMEQRWREREEQRRVREEARADKRDALIIALLNKLERE 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi326g00003 283 ProSiteProfiles Myb-like domain profile. 40 96 IPR001005 -
Vivi326g00003 283 CDD GT1 38 103 - -
Vivi326g00003 283 MobiDBLite consensus disorder prediction 136 193 - -
Vivi326g00003 283 Coils Coil 230 250 - -
Vivi326g00003 283 FunFam Zinc finger and SCAN domain-containing 20 40 101 - -
Vivi326g00003 283 PANTHER FI21293P1 12 281 - -
Vivi326g00003 283 Gene3D - 40 101 - -
Vivi326g00003 283 SMART sant 36 98 IPR001005 -
Vivi326g00003 283 Pfam Myb/SANT-like DNA-binding domain 39 123 IPR044822 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi326g00003 10 283 Trihelix Transcription Factor Family AT2G38250 53.957 3.42e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi326g00003 Myb_DNA-bind_4 7.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi326g00003 - - gmx:100778195 339.732