Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi325g00009 ATGGATCATTTTTGCTGTTTGAAGTCTTCTTTTGCTAAGCTTGTATCCACGCGATCATCCTGCGACACGGGTAAGGGGAAGAATCATCAAGGGTCAATAAAGTATGGTTTCACACTAGTGAAAGGGAGAGCTAATCATCCAATGGAGGATTTCCATGTTGCCCAGTTCGTGCAGTTACAAGGAAAAGAATTGGGTTTGTTTGCTATTTATGATGGCCATTCGGGTGATAGTGTTCCTTCCTACTTACAGAAACATCTATTTTCCAATATTTTAAAAGAGGATGGATTTTGGGAGGACCCTGCCGCATCTATCTCAAAAGCATATCTGAGCACAGATAAGGCCATTCTTTCGCATAGTTCTGATTTAGGGCGTGGCGGATCAACAGCTGTAACTGCAATACTAATCAATGGTCAACTGTTATGGACGGCTAATGTAGGAGATTCACGAGCAGTTCTTTCAAGAAAAGGCCAAGCAGTGCAATTGACTACAGATCATGAGCCCAACACAGAACGCGGCAGCATTGAAAATAAAGGTGGTTTTGTCTCCAACATTCCAGGTGACGTACCTAGAGTAAATGGACAACTGGCAGTTTCTCGTGCATTTGGAGACAAGAGCCTCAAGTCTCATTTGCGATCAGACCCTGATGTACAGGGGACCGATGTAGATGTTGATATTGATATTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGAGTAATCAAGAAGCAGTTGATATTGCTAGAAAGATAAGAGATCCACTGAAAGCAGCTAAGAATTTAACAGCTGAAGCATTAAAAAGAGATAGTAAGGATGATATATCTTGCGTCGTGGTTAGATTTAGGAGTTGA 852 0.4167 MDHFCCLKSSFAKLVSTRSSCDTGKGKNHQGSIKYGFTLVKGRANHPMEDFHVAQFVQLQGKELGLFAIYDGHSGDSVPSYLQKHLFSNILKEDGFWEDPAASISKAYLSTDKAILSHSSDLGRGGSTAVTAILINGQLLWTANVGDSRAVLSRKGQAVQLTTDHEPNTERGSIENKGGFVSNIPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQGTDVDVDIDILILASDGLWKVMSNQEAVDIARKIRDPLKAAKNLTAEALKRDSKDDISCVVVRFRS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi325g00009 283 FunFam Probable protein phosphatase 2C 39 25 282 - -
Vivi325g00009 283 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Vivi325g00009 283 PANTHER PROTEIN PHOSPHATASE 29 281 IPR015655 GO:0004722|GO:0006470
Vivi325g00009 283 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Vivi325g00009 283 Gene3D - 29 283 IPR036457 -
Vivi325g00009 283 SMART PP2C_SIG_2 45 281 IPR001932 -
Vivi325g00009 283 CDD PP2Cc 33 281 IPR001932 -
Vivi325g00009 283 SMART PP2C_4 30 279 IPR001932 -
Vivi325g00009 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi325g00009 1 282 PP2C-type Phosphatase Gene Family AT1G22280 69.097 3.88e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi325g00009 K17506 - gmx:100797292 466.848