Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi325g00007 ATGGCTGATTCACTCTCAGTTAATGTTGATTCATTACATAGCCTTGAATTAAATGCTAAGCAATCAAAATTTACTACCTATGAGGCTAAACACTTTGCATCTAGCATCCAAAAGGCTATTGCTGAATTTGTGGGTACATTTATTCTTATATTTGTTGGTTGTGGTGCTGCTCTTGTCAATGAGAGGCTGCCAATCACAGTTGTTGGCATAGCGACTGTTTCGGGCTTAGCTTTAACCGTCGCTATATATTCGGTTGGTCATGTCTCCGGTGGTCATTTCAATCCTGCTGTCACAATCGCATTAGCCGCCGTCCAAAAAATTCAGTTCAAACTTGTGCCTGTTTATGTGGTGTGTCAGTTAATGGGTGGCACACTGGCCACTCTCACTCTGAAAGTGTTGTATCATAACAAAGTGGATATTGGTGTAACACTGACCCAATATTCAAATTCAACTTCTGATCTTGAAGCATTGCTGTGGGAATCCATAATCACTTTCATATTCATGCTTACTATTTGTGGTGTTGCCACTGATCACAGAGGAGCCTATTACAGGAGCTTCGATGAATCCCGCAAGGAGTTTAGGCCCTGCCATAGTATCAGGCAATTACAAAAACATTTGGGTTTATATCATAGGTCCAACTATTGGAGCAATCTTTGCAAGTTTAGTTTACACTTTCCTAAGAGTAACAAAACCAACTCAACCAGAACTACCATATCACATGTGAAATACCATAAGCACTTAACTTTTTAA 750 0.3987 MADSLSVNVDSLHSLELNAKQSKFTTYEAKHFASSIQKAIAEFVGTFILIFVGCGAALVNERLPITVVGIATVSGLALTVAIYSVGHVSGGHFNPAVTIALAAVQKIQFKLVPVYVVCQLMGGTLATLTLKVLYHNKVDIGVTLTQYSNSTSDLEALLWESIITFIFMLTICGVATDHRGAYYRSFDESRKEFRPCHSIRQLQKHLGLYHRSNYWSNLCKFSLHFPKSNKTNSTRTTISHVKYHKHLTF 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi325g00007 249 Gene3D Glycerol uptake facilitator protein. 5 195 IPR023271 -
Vivi325g00007 249 PANTHER AQUAPORIN NIP2-1 22 181 IPR034294 -
Vivi325g00007 249 SUPERFAMILY Aquaporin-like 33 182 IPR023271 -
Vivi325g00007 249 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi325g00007 249 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi325g00007 249 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi325g00007 249 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi325g00007 249 ProSitePatterns MIP family signature. 92 100 IPR022357 -
Vivi325g00007 249 Pfam Major intrinsic protein 34 181 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi325g00007 36 179 Major Intrinsic Protein MIP AT4G19030 46.000 1.12e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi325g00007 K09874 - gmx:100798380 267.7