Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi324g00004 ATGGCTGGGAAGGTCGCGAAGGCAGCTTATGATGCGAAGATGGGAAAGCTTCTTCGAGAATACACACAAGTTTTGGTGGTTTCAGCCGACAATGTTGGATCAAACCAGCTTCAGGGTATAAGAAGGACACTGCACGAAGATTCAGTGGTAGTGATGGGGAAGAACTCATTGATGAAGCGCTCTATTATCCAAGAAGCGGAGAAAGCTGGCAACAACAACGCTTTTCTTAATCTCGTTCCACTCCTTGTGGGGAATGTTGCTTTGATCTTTACCAAAGGTGACTTGAGGGATGTTAGTGAACGGATTGCCAAGCTCAAGGTTGTTAATCCTATTCTCATGTGCCCGAAGTATATGTCATATGACTCGTACAAAACGTGTACGTATATGCAAACAGGTCAATTGCCATTGGGTCTCACGTGTTGTAACCAACAACCTTCTCAAGCTTCCGAGCCGTTTCTTGTAAGCTCAAAATTCTCGCCACCTCAACACTGTTACTTGTCGAGATCGAGACAGCTCTTGGCGACAAGTATATGGTCTCCTTTTCTTCTTTTGGCTGGTAATTTGTGA 567 0.448 MAGKVAKAAYDAKMGKLLREYTQVLVVSADNVGSNQLQGIRRTLHEDSVVVMGKNSLMKRSIIQEAEKAGNNNAFLNLVPLLVGNVALIFTKGDLRDVSERIAKLKVVNPILMCPKYMSYDSYKTCTYMQTGQLPLGLTCCNQQPSQASEPFLVSSKFSPPQHCYLSRSRQLLATSIWSPFLLLAGNL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi324g00004 188 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 5 140 - -
Vivi324g00004 188 Pfam Ribosomal protein L10 6 104 IPR001790 -
Vivi324g00004 188 SUPERFAMILY Ribosomal protein L10-like 7 108 IPR043141 -
Vivi324g00004 188 Gene3D - 3 129 IPR043141 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi324g00004 1 110 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 61.404 6.77e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi324g00004 K02941 - jre:108980032 141.739