Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi323g00001 ATGTCTTCTGGTCACCGCCGTGTCAGTTCAGGTTCAGACGGTGGAGATCCACTCCTTCTCGAGGAGAAGAAGAGAAAGCGTATGCAGTCGAACCGCGAATCTGCGAAGCGGTCGAGAATGAGGAAGCAGAAACAGGTTGAAGATCTGACCGAAGAAGCAGGTAGATTGAAAAGTGAGAACGCGGGTCTTAAGCAGAAAATTAAGGCGGCCGTGGACGCTCGTACTGAAATGGAGGCGGCAAACAATGTTATTAGGGCACAAACAAAGGAGCTTGAGGATAGATTGCAATTCCTGAACTCTGTGGTGGAAAAGGCTGAAAATGTTAATGGTCGCTCTAATGATATGTTTTCTGATCCTCTTCTCAAGCCTTGGTTCATACCTCATTCCAATTATTCTCTCATTGCTTCAAGTGATATGTCGATGCATTGA 429 0.4615 MSSGHRRVSSGSDGGDPLLLEEKKRKRMQSNRESAKRSRMRKQKQVEDLTEEAGRLKSENAGLKQKIKAAVDARTEMEAANNVIRAQTKELEDRLQFLNSVVEKAENVNGRSNDMFSDPLLKPWFIPHSNYSLIASSDMSMH 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi323g00001 142 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 68 IPR004827 GO:0003700|GO:0006355
Vivi323g00001 142 MobiDBLite consensus disorder prediction 1 54 - -
Vivi323g00001 142 Pfam bZIP transcription factor 22 79 IPR004827 GO:0003700|GO:0006355
Vivi323g00001 142 Coils Coil 70 108 - -
Vivi323g00001 142 Gene3D - 21 74 - -
Vivi323g00001 142 FunFam BZIP transcription factor 21 72 - -
Vivi323g00001 142 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Vivi323g00001 142 Coils Coil 25 66 - -
Vivi323g00001 142 PANTHER BZIP TRANSCRIPTION FACTOR 44 10 130 - -
Vivi323g00001 142 MobiDBLite consensus disorder prediction 17 54 - -
Vivi323g00001 142 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Vivi323g00001 142 CDD bZIP_plant_GBF1 24 70 IPR045314 GO:0003700|GO:0006355
Vivi323g00001 142 SUPERFAMILY Leucine zipper domain 23 73 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi323g00001 1 139 bZIP Transcription Factor Family AT3G62420 45.833 3.94e-32 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi323g00001 bZIP_1 2.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi323g00001 K25786 - gmx:780550 152.14