Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi320g00010 ATGGGAAAGAAAAAGACAGAGGCTAAAGCAAGTAGCAAAGATGTTTCTAAGAAGGAAAAATTTTCTGTCTCTGCCAAGTTGGCCAGTATGCCTGAAAAGGCATCTTCTTCGAATAAGCCAAAGCAGAAGCCTGCTCCGAAAGCTTCTACATACATTGATGATATTGATCTTCCTACCTCTGATGACTATGATGATTCCGAAGAGGAGTTAGAGCAAAAGCATAGGCCTGATGTGAAGCCTCTTGAGTTGTCTATTGCTGAAAAAGAGTTGAAAAAGCGCGAAAAGAAAGATATTTTAGCTGCCCATGTGGCTGAGCAGGCAAGGAAAGAGGCTCTTAGGGATGATCATGATGCGTTCACTGTTGTCATTGGAAGTCGGACTTCCGTGCTTGATGGAGATGATGACGCTGACGCTAATGTTAAGGATATAACAGTAGAGAATTTTTCTGTGTCTGCTCGGGGTAAAGAGCTTCTGAAAAATGCATCGGTGAAGATATCTCATGGAAAGCGGTATGGTTTGGTTGGACCGAATGGAATGGGCAAGTCAACACTTTTGAAGCTTCTTGCTTGGAGGAAGATACCAGTACCTAAGAATATTGATGTCCTTCTGGTTGAGCAGGAGGTGGTTGGCGATGATAAAACAGCGCTTGAAGCTGTTGTTTCAGCCAATGGAGAACTTGTTAAAGTTCGACAAGAAGTTTCAGATTTACAGACTGCTGCTTCTGGCAAAGAGGGTGTGGATAAAGATGATGATAGTAACGAGGGTGAGGATGTCGGAGAAAAGCTCGCAGAGCTGTATGAGAAATTACAACTGATGGGGTCTGATGCTGCTGAACCTCAAGCGTCAAAGATTTTAGCTGGTTTGGGTTTTACAAAGGATATGCAGGGCCGTCCTACGAAATCCTTTAGTGGTGGGTGGAGGATGAGAATTTCATTAGCTCGAGCACTTTTCGTTCAGCCCACTTTATTATTGCTCGATGAACCCACTAATCATCTTGACCTGAGGGCTGTTCTATGGTTGGAAGAGTACTTGTGTCGATGGAAGAAAACTTTGGTGGTTGTATCGCACGACAGGGATTTCCTCAATACTGTATGCTCAGAAATTATTCACCTGCATGATTTGAAACTTCATTTCTATCGTGGAAATTTTGATGCTTTTGAGAGTGGGTATGAACAGCGTCGTAGAGAGGTGAATAAGAAGTATGAGATTTATGACAAGCAAATGAAAGCAGCTAGAAGGACTGGAAATAAGGCTCAACAAGATAAGGTGAAGGATCGAGCTAAGTTTGCCGCTGCTAAGGAAGCGTCGAAAAGCAAAAGTAAGGGAAAGGATGATGAGGATGAGGCCCAAGTAGAGGTACCGCACAAGTGGAGAGACTACAGCGTGGCGTTCCACTTTCCCGAACCTACCGAGCTCACACCTCCACTTCTGCAGGTTATTAATGTGAGCTTTAGCTATCCAAACCGAGAGGATTTCAGACTCTCAGATGTTGATGTTGGCATTGATATGGGGACTCGTGTTGCCATTGTTGGGCCTAACGGAGCTGGAAAATCTACACTGCTAAATCTTTTAGCCGGTGATTTGAATCCAAAGGAAGGTGAAGTTCAAAGGAGTCAGAAGTTGAGAATAGGAAGATACTCCCAACATTTTGTGGACCTACTGACGATGGACGAAACACCTGTTCAGTACCTCCTTCGCCTCCACCCAGACCAGGAGGGACTAAGTAAGCAAGAGGCTGTCCGTGCAAAACTTGGCAAATTTGGGCTACCTAGTCATAATCATCTTACCCCCATTGTCAAACTATCAGGAGGGCAGAAATCTCGGGTCGTTTTCACGTCGATATCCATGTCAAGACCTCACATTTTATTGTTAGATGAACCCACAAATCATCTGGATATGCAAAGTATTGATGCGTTGGCCGATGCGCTGGATGAATTCACAGGCGGAGTTATTCTTGTTAGTCACGATTCTAGATTGATATCACGGGTCTGCGATGATGATGAAAGGAGTCAAATTTGGGTTGTTGAGGATGGCACTGTCAGAATTTTCCCCAAAACATTTGAAGATTACAAGGAAGGTTTGCTGAAAGTGATTAAAGCTGAAGTTGATGATTGA 2115 0.4383 MGKKKTEAKASSKDVSKKEKFSVSAKLASMPEKASSSNKPKQKPAPKASTYIDDIDLPTSDDYDDSEEELEQKHRPDVKPLELSIAEKELKKREKKDILAAHVAEQARKEALRDDHDAFTVVIGSRTSVLDGDDDADANVKDITVENFSVSARGKELLKNASVKISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANGELVKVRQEVSDLQTAASGKEGVDKDDDSNEGEDVGEKLAELYEKLQLMGSDAAEPQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCSEIIHLHDLKLHFYRGNFDAFESGYEQRRREVNKKYEIYDKQMKAARRTGNKAQQDKVKDRAKFAAAKEASKSKSKGKDDEDEAQVEVPHKWRDYSVAFHFPEPTELTPPLLQVINVSFSYPNREDFRLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLNPKEGEVQRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKSRVVFTSISMSRPHILLLDEPTNHLDMQSIDALADALDEFTGGVILVSHDSRLISRVCDDDERSQIWVVEDGTVRIFPKTFEDYKEGLLKVIKAEVDD 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi320g00010 704 MobiDBLite consensus disorder prediction 238 257 - -
Vivi320g00010 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 456 690 IPR027417 -
Vivi320g00010 704 FunFam ABC transporter F family member 4 141 426 - -
Vivi320g00010 704 Coils Coil 394 414 - -
Vivi320g00010 704 CDD ABCF_EF-3 477 679 - -
Vivi320g00010 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 406 IPR027417 -
Vivi320g00010 704 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 116 696 - -
Vivi320g00010 704 MobiDBLite consensus disorder prediction 1 21 - -
Vivi320g00010 704 MobiDBLite consensus disorder prediction 29 44 - -
Vivi320g00010 704 CDD ABCF_EF-3 143 375 - -
Vivi320g00010 704 SMART AAA_5 167 374 IPR003593 GO:0016887
Vivi320g00010 704 SMART AAA_5 503 679 IPR003593 GO:0016887
Vivi320g00010 704 Gene3D - 439 701 IPR027417 -
Vivi320g00010 704 Pfam ABC transporter 494 629 IPR003439 GO:0005524
Vivi320g00010 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 477 702 IPR003439 GO:0005524
Vivi320g00010 704 MobiDBLite consensus disorder prediction 1 80 - -
Vivi320g00010 704 FunFam ABC transporter F family member 4 442 704 - -
Vivi320g00010 704 ProSitePatterns ABC transporters family signature. 302 316 IPR017871 GO:0005524|GO:0016887
Vivi320g00010 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 143 398 IPR003439 GO:0005524
Vivi320g00010 704 Pfam ABC transporter 158 330 IPR003439 GO:0005524
Vivi320g00010 704 Gene3D - 140 427 IPR027417 -
Vivi320g00010 704 MobiDBLite consensus disorder prediction 410 451 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi320g00010 481 680 Calmodulin-binding Proteins AT2G36910 28.767 6.77e-12 67.4