Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi319g00018 ATGTCTTGCTCGGTTGTCGTTTCAAATTCTAATGTCTTCTCTCTCCCCTCTCCTTGCCAATTCTCTCTCTCCTCGCCTGTTTTGAAGAGAAAGAAACCGGCAAAGCTTCATATACCCGTTGCTTCTCTGACTATCGAAGTCCCGCCGGCGGTAATGACCCCGTCGCCGGAAAAGGATGTAATTGAGGTGGAGGGAAATGGTTTTTCTGTGTATTGTAAGAAGGGAAGTAGGAAACATACGGAGGATCGTTATTCTGCTTCTTCTGATGATCTTTATGAAGAAACAAAACAGGCTTTTTTTGGCATATTTGATGGGCATGGAGGTGCAAAAGCTTCAGAGTTCGCAGCAGATAACATGGAAAAGAATGTAATGGAAGAAGTGAACAGAAGAGATGAGAGTGATATTGAGGAAGCAGTGAAGCATGGCTACCTCAAAACAGATTCAGATTTCTTAAAAGAGGATGTTCATGGTGGTTCTTGCTGTGTAACAGCATTGATTAAGAACGGTAATCTTGTGGTGTCCAATGTGGGCGATTGTCGCGCTGTTATCAGCAGAGGAGGTGTTGCTGAGGCCTTAACATCTGATCACAAACCTTCAAGGAAAGATGAAAAAGACAGGATCGAAACTCAGGGTGGATATGTTGATATGTGCCGTGGCGTGTGGAGAATCCAAGGCTCTCTAGCTGTTTCTAGGAGCATTGGAGATAGACACCTGAAACAATGGGTGATAGCAGAACCTGAGACCAAAGTTCTCAGAATTGAACCTCATCATGACTTGTTAATCTTAGCTTCAGATGGATTATGGGACAAGGTTAGTAATCAGGAAGCAGTAGATATAGCTCGTCCTTTTTGTGTAGGGAACAATAAACAAGGACCCTTTCAAGCTTGTAAGAAACTTGTCGATTTATCAGCGTCACGAGGCTCTATCGATGATACAAGTGTTATGATCATCAAATTACAGAAATATATTTGA 972 0.4259 MSCSVVVSNSNVFSLPSPCQFSLSSPVLKRKKPAKLHIPVASLTIEVPPAVMTPSPEKDVIEVEGNGFSVYCKKGSRKHTEDRYSASSDDLYEETKQAFFGIFDGHGGAKASEFAADNMEKNVMEEVNRRDESDIEEAVKHGYLKTDSDFLKEDVHGGSCCVTALIKNGNLVVSNVGDCRAVISRGGVAEALTSDHKPSRKDEKDRIETQGGYVDMCRGVWRIQGSLAVSRSIGDRHLKQWVIAEPETKVLRIEPHHDLLILASDGLWDKVSNQEAVDIARPFCVGNNKQGPFQACKKLVDLSASRGSIDDTSVMIIKLQKYI 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi319g00018 323 Pfam Protein phosphatase 2C 70 311 IPR001932 -
Vivi319g00018 323 Gene3D - 66 322 IPR036457 -
Vivi319g00018 323 SMART PP2C_SIG_2 83 319 IPR001932 -
Vivi319g00018 323 SUPERFAMILY PP2C-like 67 320 IPR036457 -
Vivi319g00018 323 PANTHER PROTEIN PHOSPHATASE 2C 60 318 IPR015655 GO:0004722|GO:0006470
Vivi319g00018 323 SMART PP2C_4 60 317 IPR001932 -
Vivi319g00018 323 CDD PP2Cc 66 319 IPR001932 -
Vivi319g00018 323 ProSitePatterns PPM-type phosphatase domain signature. 99 107 IPR000222 GO:0043169
Vivi319g00018 323 FunFam probable protein phosphatase 2C 25 60 322 - -
Vivi319g00018 323 ProSiteProfiles PPM-type phosphatase domain profile. 67 319 IPR001932 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi319g00018 16 323 PP2C-type Phosphatase Gene Family AT2G30020 63.467 4.69e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi319g00018 K17506 - gmx:100818903 481.485