Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi319g00010 ATGACGAGTTTTTTTATTGATTGGGCAAAGAAATGTTTGGAGAAGTTGATAAACAGGGCAATAGCAGAAGCACGTTTTGTAGTTTGCTTCACATGCATTGCTAAGGAATTTGAAAAAGAAAGGGCTGGGTTGGAAGTAGAAAGGATAACTTTGGAACAACGTACTGAAGTGGCAATAAGAAGAAATAAAGACATTCAAGCTAATGTTGGTGTTTGGAAAGAGGACGTTGATAGGCTCATTAAAGAGAACGCCAAAATAAAACCAACATGTTTCTTAGGATTTTGTCCTGATTGCATAGGTCGATATAAAAAGGGAAAAGAGTTGGCAAACAATACGGAGGAGATTAAACGGCTAATAGAAAAGGGCGAGAAATTTGGAAATATTGAACTCCCTCGTCGTCTTCCAGATGTTGAACGCTATTCATCACAAGATTACATTTCTTTTAAAAGTAGAGAGTCTGAATACAAAGAACTGCTGGACACTCTAAAAGATGACAACAACTATATAACACAATTGCAAGGGATGGGTGGCACCGGAAAAACTACTTTGGCCAAAAATGTGGGTAAAGAACTAAAGGAATATGGACAATTCATTCATGTAATTGATACAACAGTGTCGTTTACTCCTGATATAAAAAAGATTCAAGATGATATTGCTGGACCTCTGGGATTGGAATGGGAGGGTTGTAATGAATCAGATCGAGCCGGGAAGCTATGGGACAGATTAACAAATGGTGAGAAAATTCTTCTGATAATGGATGATGTGTGGGATCAACACCCATTTCTTGATTTTGATGCAATAGGGATTCCTAAACGGGACCAACACAAAGGTTGTAGAGTTCTTGTAACTACACGCAGTAAACAACTCATGAACAAAATGAATTTTGATAAGAGTGTTGAATTGAAATTGTTATCTGAAGATGATGCGTGGATTATGTTCAAAAGGTATGCCAATATAAGCAATAGTTCCTCAAAAAATGTGATTGGTAAGGGACGTAAAATTGCAAAGGAATGTAAGCAATTACCAGTTGCAATTGCAGTTACTGCCAGCACTTTAAAAGGCCAACAACATCGAGTGCATGAATGGGATGTCAGATTAAAAGCCTTGAAGAAGCCTGTATCCGTGCATGGTGTTGATGATGATATGGTTGGAATTTATAAATGTTTGAAGTATAGCTATGACTATATGAAAGATGAAAAAGCCAAGGAATTGTTCCTCCTATGTTCTGTATTCCGAGAGGATGAAGAAATTTCTATTGAATTTCTAACCAGACTTAGCATAGGAGCGGGTCTTTTCGGGGAAGATTGTGACTTCTACAATGAGGCTCGAGACCTAGTAGCTGTATCAAAAAATAAACTCCTAGATTCTTGTTTATTGTTGGAGGTCGACGGGAATCGTGTAAAAATGCATGATTTGGTTCGTGATGTGGCTCAATGGATAGCGAAGAAAGAGATTCAAGCAGTAAATTTGTCTAACAGAAATCAAAAGTCGTTGGATGAAAGGGAAGCAAATATTAAATATTTATTATGTGAAGGGAGCGACATGGATTTGTTTTCTTGTAAGTTTGATGGTTCCAAACTTGAGACTCTAATTCTCAATGTGCATGGAGATGAAGACCACGGATGTATGGAAGTCCCAAATTCATTCTTTGAAAATATTGTCAAGCTTCGAGTTTTGGTTCTTTTAAGTAACAATGAACGATCACTATCACTACCTAATTCAATTCAATCGTTAACGAATATTCGATCTTTGATGGTTCATATGGTGGACTTAGGTGACATCTCTGTTTTGGGAAACCTACAAAGTCTTGAGAGTCTTGATTTGTCTCAATGCAAAATCAATGAATTGCCAAGCGAAATTGCAGAACTACAGAAATTGAAATTGTTGAACTTGGAAGATTGTGAAATTAGAATGAATAATCCATTTACCGTTATTGAAAGCTGCTCATCACTTGAAGAGTTGTATTTCTCAAATAGTTTTAATGGTTTTTGTCAAGTATTAACCTTACCTGAGCTGCAAAGATATCATATTCATAATGAGTGGGATGACATGGATGATTCACTATCAAAATATGTGGTTTTTCGCGGGGATGATGATACGGATTATTTTTCAAACGAAGCATTCAAGTATTTTATGCAAACAGCAAATGATCTTCGACTAAGTGGAATTAAGAGGATGTGGAGAAATATCATGCCTGAGATTGTTCCTATAGATCATGGTATGAATGATCTAATTGTGCTTAAATTGGAAGATGATTCACAACTGCAGTTCCTCATAGACAATAAACACACTGGTTCTCAAGTAACAGATGTTTTCTCCAAGTTGGTTAAACTAGAATTGTGTGAAATGGAGAAATTGGAAGAATTATGCAATGGTCCCATATTCCTTGACTTTATGGCCAATTTAGAGAAGATATCTATCGATCATTGTGAAAATTTGCGAAGCTTGTTTAAATGCAGCCTAAATCTCTGCAGTCTAAAGACTGTGAAACTAAAATCATGCTCAGCGTTAGTTTCTGTTTTTGAACTGTCAACTTCTCAAAGCTTGCCATTGTTGGAGAATTTGAAAATAAGTGATTGTGAGAAATTGGAAAACATAATTTCATTTGAAAGGAGAGCGGATGACACGATTGAAGAAATAGTTGATGGTGATAATGATGACAAGAGTTGCTACTCAATGTTTCCAAAGCTGAAAGTTCTTAAAATTGACAGATGTCCCAAATTACAATTTATACTTCCATTTATCTCTGTTCAAGATTTTTTGTTACTAGAAGTTATTAAAATAATTCGTTGTCACGAGCTGAAATACATATTTAGCCAACACCAAGATGTCAAACTCACTTCACTAAAACAAGTGGGGATTGGTGGTCTGCCAAATTTCATCGACATATGTCCAGCCATGCCTTCATCCATTTCCAAAGATGGTTCTAAGCCACAAACACAACGGGACCCTATCAAAAGCAATATATTCTCTTGGAGTACTAATATGTGTTGTTATAAATACAAATTGAGTACCAAAATTCCGTTGGTCTCTGAGGATCAACCGCAAGGCTGCTCAATCTCATTGGAACCAAATCCATATTTCCTTAACATATGGGAACGTGCTCAATGTCTTTCAAGACATTCACATTTCTTGTGCAATGTTAAAGTGATTGGACTGTATGCTATTTCAAAGATAAAATCAGTATTTATCCTGTCTAGTGCCCCAATAATGTTGGAAACTTTAACAATTGAAAAGTGTGATGAATTGAAGCACATAGTAATAGACACGGGAGATCATGATAGTACTTGTGGCAATAATTTGGGTAATGTCTTCCAAAAATTGAAAGAACTTTCCGTTGAAGATTGCATTCAATTGGAATACATATTTGGACACTACACTGATGATCATCAAAACCACGGTGAGATTAACCTTAATCTCCCGGCATTGGAAGTTCTCGACTTTCAAAATCTGCAAAGTTTTATGGCCATGTCTCCCAAACAATGTCGTACAACATTTCCAACATTGGCAAGGTTTAACCTCATTGAATGTTCTCGAGCCACTATCAAATCTATTGGTGATTTCCTGACTCATCATTCAGTAACAGAATTTGTGGACAATACAATCATAAAGGAAGTGAGCCGCAACATGGAGCATTCTCTCGCCTTGGAAAAGCTTTGCGTGCTTAATTCCAAAGTAGAAAATATCTTTTTACTCGATGAAGAAAATGGACAACAATTAAACTTCGGGTTGCAAGAAATTGAGTTGTGTAATCTGCCTGAGATGATCTGTCTTTTTGTTGGTCCCAAAAATACATTTGCTCTCACAAACCTTACATGGATAGAAATTGTGCAATGTGAAAAGCTGGAAATACTTTTCTCTGTTTCTACTTTAAGATGTCTACCACAATTGTTTAAAATAAGAATAGAAGAATGCGGAGAGTTGAAGTATATCATTGAAGATGATTTGGTGAATAAAAAATCCTCAAACACATGCTTCCCAAAGCTAAAATCGCTGGCTATAGTCAAATGCAACAAGTTGAAATGCATCTTTCCCATATCCATAGGTAAAGAGCTTCCTGGGCTAAAGGCTTTAATAATAAGAGAAGCAGGTGAGCTGAAAGATATATTCAAAGGAGAAGTTGAGATTCCAAATCTGAATTATGTAGTATTTGTCAACCTACCAAGCCTCTTCCATGCACAAGGAATTCAATTTCAGGCTGTAAATTATCGTTTTGTACAGAATTGTCAAGAACTCTCTATGACCTCAACATCCACGAATGAGCCTATTGATTATGACTTAGATTATAAAATGCGTGAAGATTTGGGGATTCTATTTGAAAAAACACAACTAGTGTCCGAAGGCATTGTTGCTGAAATTGAAGTTGAAGCAGCATCAAGACAAGAGTTGAAATCTTTACAGGAATTGATAAATGAACAATCAATGGACCTACAACATCCTCTTGGAGAAACTGATGCTACTGTCAAACCTTCTGAGTTGGAGGGTTCTACCATATCAGAAAAAACTGTAGCAGAAAATTTGTCCACCGTTTCAGAAACAAAGAATGAGTCACCTATACAAAAGGGTATCGAGATAAGTGTTGAAGAAGTAACTAAATCAACAACTGATGTGACGGCAAAAACATCATCAACTCCATTAGAGTTAGATATTGAGATCAGTGTTGAACAAGGAGCTACATCAATTAAATCCAAGACAATAGCGTCATCAACTCAATTGGTAAATCCATCATCAGATCCAATAGTTACTTCTGAGCAAAAAAGTTCTTTACATGAGTTGGTAAATGAAAAATCAATGGACCAACAAGGTCCTCTTAGAGAAACTGATGCTACTGTCAAACCTTCTGAGATAAATAATTTGGAGGGTTCTACTATATCAGAAAAAACTGTAGCAGAAAATTTGTCCACCATTTCAGAAACAAAGAATGAGTCACCTGTACAAAAGGGTATCGAGATAAGTGTTGAAAAAGTAACTAAATCAACAACTGACGTGAAGGCAAAAACATCATCAACTCCTTTAGAGTTAGGTATCGAGATATGTGTTGAAGAAGGAACTACTTTGAAAGATGCCAAGACAAAATCATCCTCATCTTCCCATGAAGATGGTGATAGCCAAATAGTCTTGAATTCTATTTCCATTGCAACGACCGAAACCAATGATCAAGTTTCTTTAAATGATGATGTTGCCGTGAAAGTAAGCTCAATTGTTGAGCAACAATTTTCTAAGGAAGATGATAAAATAGTTTCAAAAACAAGACCCTTTTCTATTGCATCTCAGTTTCCTTCAATGCCTTCTAAAGGTGACCCTTCTCAAAAAGTAGAGGAGTTAAGTTCTTCTTTGCTTGTCACAAGGGAGCTTGAACAACTAGTCTCCAAGAAACATCTGGATTATGAGAACTTGTCTTTGTTAACTGATTTTCTTGTTAAGCATCCTTCTGTTCTTTTAAGGGACACTTCACTTAGTAACAGATACAAGGGTTATGCTTATAACTGTCTAGCTGAGCTACTAAAATTCCTCCAAACCCATAGTGTTTTGGATGTGTTAGGTTCAAGCCACACTGAATTTATTGAGTTATTACAAGATGTCCGCAAATGTGGTTTTGCTAAGGAATGGTTGGATGTTGTCGAAAAGCGCGTTTTGTTTCCTGGGTTACATGTCTCTCAAGATGCATTGCAAAAACTGTGGAACTCAAATCACATATTGACTCAACAAGTAGAGGATCTAAAGCAACAATTGGCTTCCTCTAAAGCTGTTTTAGAGAGTATCATTCAACAGGACCCACAAATTTTAGAAACCTCTGCTTCTTTAAGTGATCCTATTGGCTATTAG 5826 0.3635 MTSFFIDWAKKCLEKLINRAIAEARFVVCFTCIAKEFEKERAGLEVERITLEQRTEVAIRRNKDIQANVGVWKEDVDRLIKENAKIKPTCFLGFCPDCIGRYKKGKELANNTEEIKRLIEKGEKFGNIELPRRLPDVERYSSQDYISFKSRESEYKELLDTLKDDNNYITQLQGMGGTGKTTLAKNVGKELKEYGQFIHVIDTTVSFTPDIKKIQDDIAGPLGLEWEGCNESDRAGKLWDRLTNGEKILLIMDDVWDQHPFLDFDAIGIPKRDQHKGCRVLVTTRSKQLMNKMNFDKSVELKLLSEDDAWIMFKRYANISNSSSKNVIGKGRKIAKECKQLPVAIAVTASTLKGQQHRVHEWDVRLKALKKPVSVHGVDDDMVGIYKCLKYSYDYMKDEKAKELFLLCSVFREDEEISIEFLTRLSIGAGLFGEDCDFYNEARDLVAVSKNKLLDSCLLLEVDGNRVKMHDLVRDVAQWIAKKEIQAVNLSNRNQKSLDEREANIKYLLCEGSDMDLFSCKFDGSKLETLILNVHGDEDHGCMEVPNSFFENIVKLRVLVLLSNNERSLSLPNSIQSLTNIRSLMVHMVDLGDISVLGNLQSLESLDLSQCKINELPSEIAELQKLKLLNLEDCEIRMNNPFTVIESCSSLEELYFSNSFNGFCQVLTLPELQRYHIHNEWDDMDDSLSKYVVFRGDDDTDYFSNEAFKYFMQTANDLRLSGIKRMWRNIMPEIVPIDHGMNDLIVLKLEDDSQLQFLIDNKHTGSQVTDVFSKLVKLELCEMEKLEELCNGPIFLDFMANLEKISIDHCENLRSLFKCSLNLCSLKTVKLKSCSALVSVFELSTSQSLPLLENLKISDCEKLENIISFERRADDTIEEIVDGDNDDKSCYSMFPKLKVLKIDRCPKLQFILPFISVQDFLLLEVIKIIRCHELKYIFSQHQDVKLTSLKQVGIGGLPNFIDICPAMPSSISKDGSKPQTQRDPIKSNIFSWSTNMCCYKYKLSTKIPLVSEDQPQGCSISLEPNPYFLNIWERAQCLSRHSHFLCNVKVIGLYAISKIKSVFILSSAPIMLETLTIEKCDELKHIVIDTGDHDSTCGNNLGNVFQKLKELSVEDCIQLEYIFGHYTDDHQNHGEINLNLPALEVLDFQNLQSFMAMSPKQCRTTFPTLARFNLIECSRATIKSIGDFLTHHSVTEFVDNTIIKEVSRNMEHSLALEKLCVLNSKVENIFLLDEENGQQLNFGLQEIELCNLPEMICLFVGPKNTFALTNLTWIEIVQCEKLEILFSVSTLRCLPQLFKIRIEECGELKYIIEDDLVNKKSSNTCFPKLKSLAIVKCNKLKCIFPISIGKELPGLKALIIREAGELKDIFKGEVEIPNLNYVVFVNLPSLFHAQGIQFQAVNYRFVQNCQELSMTSTSTNEPIDYDLDYKMREDLGILFEKTQLVSEGIVAEIEVEAASRQELKSLQELINEQSMDLQHPLGETDATVKPSELEGSTISEKTVAENLSTVSETKNESPIQKGIEISVEEVTKSTTDVTAKTSSTPLELDIEISVEQGATSIKSKTIASSTQLVNPSSDPIVTSEQKSSLHELVNEKSMDQQGPLRETDATVKPSEINNLEGSTISEKTVAENLSTISETKNESPVQKGIEISVEKVTKSTTDVKAKTSSTPLELGIEICVEEGTTLKDAKTKSSSSSHEDGDSQIVLNSISIATTETNDQVSLNDDVAVKVSSIVEQQFSKEDDKIVSKTRPFSIASQFPSMPSKGDPSQKVEELSSSLLVTRELEQLVSKKHLDYENLSLLTDFLVKHPSVLLRDTSLSNRYKGYAYNCLAELLKFLQTHSVLDVLGSSHTEFIELLQDVRKCGFAKEWLDVVEKRVLFPGLHVSQDALQKLWNSNHILTQQVEDLKQQLASSKAVLESIIQQDPQILETSASLSDPIGY 1941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi319g00010 1941 Gene3D - 303 397 IPR042197 -
Vivi319g00010 1941 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 408 IPR027417 -
Vivi319g00010 1941 Gene3D - 139 301 IPR027417 -
Vivi319g00010 1941 SUPERFAMILY L domain-like 1079 1390 - -
Vivi319g00010 1941 Gene3D Ribonuclease Inhibitor 465 691 IPR032675 -
Vivi319g00010 1941 ProSiteProfiles Leucine-rich repeat profile. 602 623 IPR001611 GO:0005515
Vivi319g00010 1941 Coils Coil 1897 1924 - -
Vivi319g00010 1941 Gene3D Ribonuclease Inhibitor 716 879 IPR032675 -
Vivi319g00010 1941 FunFam Probable disease resistance protein At1g61300 131 298 - -
Vivi319g00010 1941 SUPERFAMILY L domain-like 468 959 - -
Vivi319g00010 1941 PRINTS Disease resistance protein signature 242 256 - -
Vivi319g00010 1941 PRINTS Disease resistance protein signature 169 184 - -
Vivi319g00010 1941 PRINTS Disease resistance protein signature 338 352 - -
Vivi319g00010 1941 PRINTS Disease resistance protein signature 598 614 - -
Vivi319g00010 1941 Gene3D Ribonuclease Inhibitor 1029 1392 IPR032675 -
Vivi319g00010 1941 Pfam NB-ARC domain 155 394 IPR002182 GO:0043531
Vivi319g00010 1941 Coils Coil 34 54 - -
Vivi319g00010 1941 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 922 1178 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi319g00010 172 634 WRKY Transcription Factor Family AT5G45050 23.729 2.37e-15 80.5