Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi318g00035 ATGATTTCGATCATCAAATCCAATGACGATGATAATAATATTAACATTGAGGTTGACATTGAGTCATCAAAAGATGATGTTGATGCAAGAACTGGCATGAAGAAAGGGCCGTGGACCCCACAAGAAGACATGATCTTGATAGAGTACGTGAACAAGCATGGTGAAGGGAATTGGAATTCTGTTCAGAAGAATTCAGGATTGTTGAGATGTGGAAAAAGCTGCAGACTTAGATGGGCCAATCATCTAAGGCCAAATCTAAAGAAAGGTTCATTTTCTCAAGAGGAAGAAAGAATCATCATTCAACTTCATGCTAAGCTTGGAAACAAATGGGCTAGAATGGCTGCTCAGTTGCCGGGAAGAACGGATAATGAGATCAAGAACTTCTGGAACACGAGGATGAAAAGGCGTCAAAGAGCGGGTTTACCTATTTACCCTCCAGAAATCCATGCAGAAGCTCTTTCATACAACAATCATATGATGCTACAACATGAGCCATTCTCTTCTTCATCATCATTTTCCTTACTCTTATCTTCATGTTACCCTAAGAAGCTTGATGATCCAAACACAAACAGTTATGATTACAATCCTATGCAAAACAACTCTGATTCTGCTTACACCCACCCATATCCACAATTCACCTTTTCCAATGATGAAAACCTAGAGACTAATGAAAATCTTGCTTTGAAAAATTCACCTTCACTTTCTCCTTATCCATCTCCATCCTCAAATGTTTTCAACCAAGGTTTTACTCCTCCAAGTGATGATCATTCATATGATCACCAATATTCTGAGAACTTGAGCTATGGTCATCATGGATTCAATGCAGGATCCATGTATGATTCTGCAACTACTGCTTCATCTTATGCTAGCGGTGTTAATGATTACTATGAAGTTGCACCGTTATCGTCTGAAGGAAGAAATAGTGGACTTTTGGATGATCTTGTGAAGGAGGGTAGAAGTATTTCAAGCAATGACAAGGGTAAGAGTGTCGACTCAAACAAGAGGAAACGAATGGAGGCTGAAGAATATGAAGATGAAGAAGGCATTGCTTCTTTGGTGTCAGGTTCAATAAAGAAGAACAAGAGCTTTGATGAGACTCAGAAGAAAGATTTTAGCTCTTCTGAATTGTCAACAGGGAACAAACCATTTGTGGATGATCCTTTAGGAGAGATGAATGCATTGTACGATGATGACTTGGATTGCTTGCTCCACAATTTTCCCTCAGAAATTCCAATGCCAGAATGGTACTGTAGAGGAAAAGGCCAAACACTGGGACTTGAAACTCAAACTGATCATGCTTCTCCATCATCTGGCCCTGGCCCCACCAATCAAGAATTTGCTTGGACTCTTGGATCAAGTTGGAATAACATGCCTGGCATATGTTAA 1386 0.3983 MISIIKSNDDDNNINIEVDIESSKDDVDARTGMKKGPWTPQEDMILIEYVNKHGEGNWNSVQKNSGLLRCGKSCRLRWANHLRPNLKKGSFSQEEERIIIQLHAKLGNKWARMAAQLPGRTDNEIKNFWNTRMKRRQRAGLPIYPPEIHAEALSYNNHMMLQHEPFSSSSSFSLLLSSCYPKKLDDPNTNSYDYNPMQNNSDSAYTHPYPQFTFSNDENLETNENLALKNSPSLSPYPSPSSNVFNQGFTPPSDDHSYDHQYSENLSYGHHGFNAGSMYDSATTASSYASGVNDYYEVAPLSSEGRNSGLLDDLVKEGRSISSNDKGKSVDSNKRKRMEAEEYEDEEGIASLVSGSIKKNKSFDETQKKDFSSSELSTGNKPFVDDPLGEMNALYDDDLDCLLHNFPSEIPMPEWYCRGKGQTLGLETQTDHASPSSGPGPTNQEFAWTLGSSWNNMPGIC 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi318g00035 461 MobiDBLite consensus disorder prediction 363 384 - -
Vivi318g00035 461 MobiDBLite consensus disorder prediction 228 263 - -
Vivi318g00035 461 MobiDBLite consensus disorder prediction 190 216 - -
Vivi318g00035 461 FunFam MYB-related transcription factor 34 87 - -
Vivi318g00035 461 MobiDBLite consensus disorder prediction 426 446 - -
Vivi318g00035 461 MobiDBLite consensus disorder prediction 320 348 - -
Vivi318g00035 461 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Vivi318g00035 461 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
Vivi318g00035 461 MobiDBLite consensus disorder prediction 320 343 - -
Vivi318g00035 461 FunFam Transcription factor MYB97 90 165 - -
Vivi318g00035 461 SUPERFAMILY Homeodomain-like 32 129 IPR009057 -
Vivi318g00035 461 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
Vivi318g00035 461 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Vivi318g00035 461 Gene3D - 90 136 - -
Vivi318g00035 461 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 82 IPR017930 -
Vivi318g00035 461 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 24 422 - -
Vivi318g00035 461 CDD SANT 37 82 IPR001005 -
Vivi318g00035 461 Gene3D - 34 87 - -
Vivi318g00035 461 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 137 IPR017930 -
Vivi318g00035 461 SMART sant 87 135 IPR001005 -
Vivi318g00035 461 SMART sant 34 84 IPR001005 -
Vivi318g00035 461 CDD SANT 90 131 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi318g00035 32 156 MYB Transcription Factor Family AT5G06100 77.600 2.41e-70 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi318g00035 Myb_DNA-binding 7.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi318g00035 K09422 - gmx:100784779 439.499