Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi318g00005 ATGGCCAACATGGAACAAACCTCTAAGGAAGTTCCTGCTGATTCTTCCATAGCAGATCAATCCAATTCCAATTCCAGTAGTATTACTCAAGTAAATTCCATGACTGAATTTTCCCAAGACGAGGAAGCTCTTATCATCAGGATGTATAAACTACTAGGAGATAGGTGGCCATTAATTGCTGGAAGAATTCCTGGAAGAACTGCTGAAGATATAAAGAATTACTGGACTTCAAGATACGCTTTCACTAGCCAATCAAGTGAATAA 264 0.3864 MANMEQTSKEVPADSSIADQSNSNSSSITQVNSMTEFSQDEEALIIRMYKLLGDRWPLIAGRIPGRTAEDIKNYWTSRYAFTSQSSE 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi318g00005 87 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 35 78 - -
Vivi318g00005 87 SMART sant 33 81 IPR001005 -
Vivi318g00005 87 FunFam MYB-like transcription factor 36 78 - -
Vivi318g00005 87 CDD SANT 36 75 IPR001005 -
Vivi318g00005 87 SUPERFAMILY Homeodomain-like 36 78 IPR009057 -
Vivi318g00005 87 Gene3D - 36 78 - -
Vivi318g00005 87 MobiDBLite consensus disorder prediction 1 34 - -
Vivi318g00005 87 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 83 IPR017930 -
Vivi318g00005 87 Pfam Myb-like DNA-binding domain 36 76 IPR001005 -
Vivi318g00005 87 ProSiteProfiles Myb-like domain profile. 37 79 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi318g00005 37 80 MYB Transcription Factor Family AT5G14750 56.818 1.43e-15 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi318g00005 Myb_DNA-binding 6.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi318g00005 - - vvo:131629086 152.525