Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi317g00020 ATGGCTAACCCTATCAATGAAAAAACTAGTGTTTGGTGGGATTTGGACAATTGTTCCATGCCGCAAATCATCAATGTTGATGAAATTATACTGGGAATCCTTTCAAAACTGCAAAGAATTAGTATAACTGGGGAGATACAAATGCATATCTACGGTAATATGACGACAAATCTACAGGCTCAACTCCATTATCGAACAATTTTTTTCCAGCATGTAGTTACGGGTTGGCAAGGTCAAGGTCGAGATAAATGTGACAAAGTTCTTTTACTGAATTTGTATAAGTGGGTACTTGATAACCCACCTCCCGCTAATATAGTTTTATTATCAGGAGAGATAGATTTCTCGTTTTCTCTACACAGTTTAAGAAACCTTCGGTATTTCATTGTCTTAATTAATCCTATTCAAACCTCTAGATCGTTATGCGTAGGTGCTGATAGACTTTTAAGTTGGAACAATATCATTACTGACTGTATGAAAATTGTTGTGAATGTGGGGAGAAATCCTCCTTTAGAGTTGAGCAGATCTATCACTACCCGCCCTCGTGGATTTAATCCTAGTACATGTCTTTTGGGATCTGGACTGCTGTCTCATTCCCACCATTCTTAA 606 0.3762 MANPINEKTSVWWDLDNCSMPQIINVDEIILGILSKLQRISITGEIQMHIYGNMTTNLQAQLHYRTIFFQHVVTGWQGQGRDKCDKVLLLNLYKWVLDNPPPANIVLLSGEIDFSFSLHSLRNLRYFIVLINPIQTSRSLCVGADRLLSWNNIITDCMKIVVNVGRNPPLELSRSITTRPRGFNPSTCLLGSGLLSHSHHS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi317g00020 201 PANTHER LIMKAIN B LKAP 6 151 IPR024768 GO:0005777|GO:0010468
Vivi317g00020 201 CDD PIN_limkain_b1_N_like 8 133 - -
Vivi317g00020 201 Pfam NYN domain 8 149 IPR021139 GO:0004540
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi317g00020 2 150 C2H2 Transcription Factor Family AT5G61190 35.714 1.70e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi317g00020 - - vvo:131620239 379.793