Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi316g00012 ATGTCAACGGCACCACCGTCCAAACGCGATAAGTTGCAATGGGAATATCCTGTTGCTGGTTTAATATCCGGATTCGCCACCTTAACCGTGAAGTATCCCCTCGACCTTGTCTCAACTAGGCTTCAAGTTAACGATGGTCGACTCTTCTCTCAATTTCCTAGATACAAGAACACCGCTCACGCCATTTTCACCATTGCTCGCTTCGACGGATTGAAAGGCCTATATGCAGGCTTTCTTGCTGGGATTCTTGGGGCAAGTATTTCATCTGGTTTAGCACTCGTTGGCTATGCAAGAGCTAAACAAAAACATGCTGAGAGAAAAGAGGAGAAGTTTAGTCCAGGTCTTGCCTCAATTGTGGAAACGGGAGTTTTGGTTTGCTTGTGCGCAAATCCTGTTTGGATAGTGAAGACAAGATTGCAGCTTCAGACTCCTCTTCATCAGACACGGCCATACTCTGGGCTCTATGATGCATTTAGGACCATAGTGAGGGAAGAAGGGTTTAGAGCACTTTTCAGAGGAATTGTTCCTGGTTTATTCCTGGTCGCTTATGGCGCTATTCACCTCACTGTATACCAGGAGCTTCGTAAAACTCTTGCTCATTTGAAGACTAAAGGAAGTAATATACAACATCAAAACCCTGATAAAAGTTTGAATTCTGTTGATTCTGCTGTTCTTGGAGCAACCTCAAAAGCTGCTGCAATACTCCCAGCCTATCCATTTAATGTTATACGAACTCGTTTACAGCTACGACCTAACAGTGATGGGATATCAAGATATAAGAATAGTTGGCATGTTGTGAAAGAAACAGCACGATTTGAAGGTGTTCGAGGTTTTTACAAAGGAATCACTGCAAACCTTTTGAAAAACATTCCCGCTGCTTCAATAACATTTGTTGTTTATGAAAATGTTCTAAAATTACTTAAAGAGGAGAAGGAATGA 939 0.4228 MSTAPPSKRDKLQWEYPVAGLISGFATLTVKYPLDLVSTRLQVNDGRLFSQFPRYKNTAHAIFTIARFDGLKGLYAGFLAGILGASISSGLALVGYARAKQKHAERKEEKFSPGLASIVETGVLVCLCANPVWIVKTRLQLQTPLHQTRPYSGLYDAFRTIVREEGFRALFRGIVPGLFLVAYGAIHLTVYQELRKTLAHLKTKGSNIQHQNPDKSLNSVDSAVLGATSKAAAILPAYPFNVIRTRLQLRPNSDGISRYKNSWHVVKETARFEGVRGFYKGITANLLKNIPAASITFVVYENVLKLLKEEKE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi316g00012 312 Gene3D Mitochondrial carrier domain 118 312 IPR023395 -
Vivi316g00012 312 Gene3D Mitochondrial carrier domain 3 117 IPR023395 -
Vivi316g00012 312 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 13 309 IPR044712 GO:0006862|GO:0055085
Vivi316g00012 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 102 IPR018108 -
Vivi316g00012 312 Pfam Mitochondrial carrier protein 217 309 IPR018108 -
Vivi316g00012 312 Pfam Mitochondrial carrier protein 14 101 IPR018108 -
Vivi316g00012 312 Pfam Mitochondrial carrier protein 122 199 IPR018108 -
Vivi316g00012 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 197 IPR018108 -
Vivi316g00012 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 306 IPR018108 -
Vivi316g00012 312 FunFam Folate transporter 1, chloroplastic 108 312 - -
Vivi316g00012 312 SUPERFAMILY Mitochondrial carrier 14 302 IPR023395 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi316g00012 33 309 Chloroplast and Mitochondria Gene Families AT1G25380 28.521 4.72e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi316g00012 K15115 - gmx:100809599 410.994