Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi315g00056 ATGGAACATAAACCTCCAATTGAAGGAGAAGGCCAACCTATAAGATGTAAAGCGGCGGTTGTAAGAAGGCCTGGTGAGCCATTGGTGATTGAAGAGATCACCGTGGCACCACCAATGGCTCGTGAGGTCCGGATTCGTGTTCTGTGTTCCTCTATCTGCCATATCGATCTCGCTTTTTCTAACATGAAGGACCCTCCTGGCTTTTTCCCAAGAATTCTTGGGCATGAGGCAGCTGGGGTTGTGGAAAGTGTAGGGAAGGATGTAACTGAAGTTACAAAAGGAGATGTTGTTGTTCCAATTTTCCTACCAGATTGTGGAGAGTGTACAGATTGCAAATCAACCAAGAGCAACCTCTGTACTAATTTCCCTTTCAAGGTGTCTCCATGGATGCTTAGACACGGTACTTCTAGATTCACCGACTCAAATGGAGAAATCATATATCATTTCATGAATGTTTCAAGTTTTAGCGAGTACACTGTGGTTGACATTGCCAATGTAACAAAGATTGACAAAGAAGTTCCTCCAGAAAGGGCGTGCCTTCTTAGTTGTGGTATAGGAGCAGGAGTAGGTGCTCCTTGGAGAACTGCAGGTGTGGAGCCAGGGTCTACGGTAGCTATTTTTGGTATGGGATCTATTGGACTAGCGGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACTAAGATTATAGGTGTAGATGTCAACCTAGAAAAATTTGAAGCTGGTAAAAAGTTTGGGCTCACAGACTTTATCCATGCTGGAGAATGTACGAACAAATCTGTGAGCCAGGTCATCATAGAGATGACTGACGGGGGAGCTGATTATTGCTTTGAATGTGTTGGTATGGCGTCATTAGTGCATGAGGCATATGCTTCTTGCAGAAAGGGTTGGGGAAAAACAATTGTCTTAGGATTGGATAAACCTGGATCCAAGTTGAGCCTCAGTTCTAGTGAGGTCCTTCATGATGGGAAGACCCTTAAGGGAAACTTATTTGGAGGACTCAAACCTAAGTCTCATGTTTCCGTTCTACTCAAGCGATACATGGACAAGGAACTGCAGTTGGATGAATTTGTCACTCATGAAGTGGAGTTTAAGGACATAAACAAAGCTTTTGATTTATTGAGAAATGGAGAATGTCTTCGATGCGTGATTAAGATGGAAAAATGA 1164 0.4356 MEHKPPIEGEGQPIRCKAAVVRRPGEPLVIEEITVAPPMAREVRIRVLCSSICHIDLAFSNMKDPPGFFPRILGHEAAGVVESVGKDVTEVTKGDVVVPIFLPDCGECTDCKSTKSNLCTNFPFKVSPWMLRHGTSRFTDSNGEIIYHFMNVSSFSEYTVVDIANVTKIDKEVPPERACLLSCGIGAGVGAPWRTAGVEPGSTVAIFGMGSIGLAVAEGARLCGATKIIGVDVNLEKFEAGKKFGLTDFIHAGECTNKSVSQVIIEMTDGGADYCFECVGMASLVHEAYASCRKGWGKTIVLGLDKPGSKLSLSSSEVLHDGKTLKGNLFGGLKPKSHVSVLLKRYMDKELQLDEFVTHEVEFKDINKAFDLLRNGECLRCVIKMEK 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi315g00056 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 348 IPR036291 -
Vivi315g00056 387 SUPERFAMILY GroES-like 10 189 IPR011032 -
Vivi315g00056 387 Gene3D - 188 328 - -
Vivi315g00056 387 FunFam Alcohol dehydrogenase 6 19 198 - -
Vivi315g00056 387 PANTHER ALCOHOL DEHYDROGENASE 11 383 - -
Vivi315g00056 387 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Vivi315g00056 387 Gene3D - 19 380 - -
Vivi315g00056 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Vivi315g00056 387 FunFam S-(hydroxymethyl)glutathione dehydrogenase 188 328 - -
Vivi315g00056 387 SUPERFAMILY GroES-like 337 384 IPR011032 -
Vivi315g00056 387 Pfam Zinc-binding dehydrogenase 212 332 IPR013149 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi315g00056 42 373 Monolignol Biosynthesis Gene Families AT2G21730 25.959 3.84e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi315g00056 K00121 - gmx:100817521 647.891