Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi315g00040 ATGGATGTTCATGTGATAAATGCTGAAGAAGAAAGTGATCATCAAGCTAAGTCAGATGACGCGGATGCAGAACCTAGTGACAGTGAAATTAACAATGCTGAAAACTCTGGATTTTACGATGAGGATGGGATTTCCGAGCCGTATTTGGGTATGGAATTCGATTCAGAAGAAGTTGCCAAGGCTTACTATGATGATTACGCGAAGCACATCGGTTTCACCTCTAAGGTTGGCTCACGTAGCCGCGCTAAAGCCGACGGGTTGAATGTGTATAAGGAGTTTGTGTGTGAGAGGGAGGGTTTAAAGAAAAGGTTTAATGAGGGGTGTGACGCGATGATTAGGATTGAGCTGAAGGGTCAAAATAAATGGGTTGTAACCAAGTTTGTGAGGGAGCATAGTCATTCGACGGGGAGTTCCAGCGAGGCGCCGAGCCTTCATCAGGGTAAGCATTTTTCCAGTGTCGGGAGGACTATGCCTGAGAGTTATCAAGGAGTTGGACTTGTTCCGAGTGGTGTCATGTATTTATCTATGGATGGGAATCATCATATTTCTAATCAGAATAGTTGTGCGGTGCTAAATATTCATGCTGCCACTGCTTCTGAAGTAAGTCACCCTGTTAAAAATGCCACATCAGGTAATTATACTGTCAGGCCCCCTTTTCAAAACAGGACATTAGGGAAGGATGCCCATAATCTGCTGGAGTATTTTATGAAAATGCAGGCTGAGAATCCTGGTTTCTTCTATGCTATACAGCTGGATGAAGACAATCATATGTCGAATGTCTTTTGGGCTGATGCCCGATCCAGGACAGCTTACAGTCATTTTGGTGATGCAGTTCATCTGGATACCACGTGCAGAGCTAACCAGTATAGAGTGCCATTTGCTCCTTTTACTGGAGTCAACAATCATGGCCAGGTGGTTTTGTTTGGTTGTGCACTCCTTTTGGACGACTCGGAGGCTTCTTTTTTGTGGCTCTTTAAGACATTTCTCACAGCAATGAATGATCGACAGCCTGTCTCGTTAATTACCGATCAAGACAGAGCCATACAGGCAGCAGTTTCACAAGTTTTCCCACAAACTCGCCACTGTATTAACAAGTGGCATGTATTGAGAGAAGGCCAGGAAAAGTTGGCCCATGTGTGTCTATCGCATCCAAATTTTCAGGGTGAACTTTATAATTGTATTAACTTGACAGAAACCATCGAAGAGTTTGAGTTGTCTTGGAATTCTATCCTTGATAAATATGAGCTTAGAAGCAATGATTGGCTTCAGTCCTTGTATAATGCTCGTGCTCAATGGGTTCCAGCATACTTCCGTGATTCATTTTTTGCTGCAATGTCTCCTAATCAAGGATTTGGTGGTTCTTTTTTTGATGGTTATGTCATCCAACAGATGACATTGCCATTGTTCTTTAAGCAATATGAAAAAGCTCTAGAGAGCTGGATTGAAAAGGAAATAGAAGCAGACTTCGAGACAATTTGCACGACACCAGTTTTGAGGACACCTTCACCAATGGAGAAACAGGCTGCTAATCTTTATACAAGAAAAATATTTTTGAAGTTTCAGGAAGAGCTAGTTGAAACTTTTGTTTATACTGCAAATATAATTGAAGGAGATGATGTAAATAGCACATTCAAGGTTGCGAAATTTGAGGATGTTGACAAGGCATATACTGTTGCATTCAACCATGCTGAATTGAGAGCTAACTGTACTTGCCAAATGTTTGAGTATTCAGGCATTCTTTGCAGGCACATTTTAACTGTTTTCACTGTGACAAATGTACTTACATTACCATCCTATTACATCTTAAAACGGTGGACAAAAAATGCAAAAAGTAGCGCTGGATCGGATGAACGTACTGGTGAATTACATAGTCAGGAGTCTCTGACATTGAGGTACAGTAATCTATGTCGGGAAGCCATAAGATATGCCGAGGAAGGAGCAGTAACTGTGGAAACTTATAATGCTGCAGTGACTGGTCTTAAAGAAGGTGGAAAGAAGGTTGCTGCGATGAAAAGAAGTGTTGCCAAAGCAACACCTCCTAATAATCAAGTCAGCGGGACTACTTATAATGACAAGAAGACCACCACCAGTTCAACTTCAGATTTAACTCCTCTTTTGTGGCCGCGACACGATGAAATAACGAGGTTTAATCTTAATGATTCTGGTGGTCCAGTTCAATCAGTTGCTGACCTAAATTTGCCACGAACGGCCCCAGTGTATCTTCATCGAGATGATGGTTCTTCTGGAAACATGGCGGTTCTTCCATGCCTAAAATCCATGACATGGGTAATGGAGAACAAAAACTCCAGTCATGGGAGTAAAGTAGCTGTTATCAATCTGAAGTTGCAAGATTATGGTAGGAGTCCATCAACAGAAGCTGAGGTTAAGTTTCAGCTCTCAAGAGTTTCTTTGGAGCCAATGCTGAAGTCTATGGCCTATATCAGTGAACAGCTCTCAACACCAGCAAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATGCGGATACAACATCCGGCGAGTCAGAAGTTAAGTTTCAGGTGTCCAAGGATACATTGGGTGCTATGCTACGATCAATGGCCTATATCCGCGAGCAACTATCTCATGCTGGAGATGGACAATCAGAACCTCTGTTGAAAAAGCATAGGAAGTAA 2655 0.4207 MDVHVINAEEESDHQAKSDDADAEPSDSEINNAENSGFYDEDGISEPYLGMEFDSEEVAKAYYDDYAKHIGFTSKVGSRSRAKADGLNVYKEFVCEREGLKKRFNEGCDAMIRIELKGQNKWVVTKFVREHSHSTGSSSEAPSLHQGKHFSSVGRTMPESYQGVGLVPSGVMYLSMDGNHHISNQNSCAVLNIHAATASEVSHPVKNATSGNYTVRPPFQNRTLGKDAHNLLEYFMKMQAENPGFFYAIQLDEDNHMSNVFWADARSRTAYSHFGDAVHLDTTCRANQYRVPFAPFTGVNNHGQVVLFGCALLLDDSEASFLWLFKTFLTAMNDRQPVSLITDQDRAIQAAVSQVFPQTRHCINKWHVLREGQEKLAHVCLSHPNFQGELYNCINLTETIEEFELSWNSILDKYELRSNDWLQSLYNARAQWVPAYFRDSFFAAMSPNQGFGGSFFDGYVIQQMTLPLFFKQYEKALESWIEKEIEADFETICTTPVLRTPSPMEKQAANLYTRKIFLKFQEELVETFVYTANIIEGDDVNSTFKVAKFEDVDKAYTVAFNHAELRANCTCQMFEYSGILCRHILTVFTVTNVLTLPSYYILKRWTKNAKSSAGSDERTGELHSQESLTLRYSNLCREAIRYAEEGAVTVETYNAAVTGLKEGGKKVAAMKRSVAKATPPNNQVSGTTYNDKKTTTSSTSDLTPLLWPRHDEITRFNLNDSGGPVQSVADLNLPRTAPVYLHRDDGSSGNMAVLPCLKSMTWVMENKNSSHGSKVAVINLKLQDYGRSPSTEAEVKFQLSRVSLEPMLKSMAYISEQLSTPANKVAVINLKLQDADTTSGESEVKFQVSKDTLGAMLRSMAYIREQLSHAGDGQSEPLLKKHRK 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi315g00040 884 Pfam FAR1 DNA-binding domain 62 134 IPR004330 -
Vivi315g00040 884 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 41 668 IPR031052 GO:0006355
Vivi315g00040 884 MobiDBLite consensus disorder prediction 677 703 - -
Vivi315g00040 884 Pfam MULE transposase domain 278 369 IPR018289 -
Vivi315g00040 884 MobiDBLite consensus disorder prediction 133 152 - -
Vivi315g00040 884 SMART 26again6 567 594 IPR006564 GO:0008270
Vivi315g00040 884 MobiDBLite consensus disorder prediction 1 41 - -
Vivi315g00040 884 Pfam SWIM zinc finger 565 590 IPR007527 GO:0008270
Vivi315g00040 884 ProSiteProfiles Zinc finger SWIM-type profile. 556 592 IPR007527 GO:0008270
Vivi315g00040 884 MobiDBLite consensus disorder prediction 1 24 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi315g00040 MULE 1.7e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi315g00040 - - gmx:100786516 1392.48