Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi315g00018 ATGAAGAAGGTTTCTCTTTATGCTTGTTTATTACTCAACTTGAGTCTTTTGGCTATTGTTCCATATAGCAAAGCTAGTCAAGCTGATAAACTTGATGAGTTAATTCTGTCTAGAAGCTCACAGAATCCTCCCAAGACTTTTACTTGGGCAGCTGAAGATGCATTGCAAACACAGTCTTCTTCATCTGCTTATGTTGTACCTCCTCAAGAGGAGCAAAGGCTAGCTGACAAGATTGTCACATTGCCTGGCCAACCCTATGGAGTTAATTTTGATCATTACTCAGGCTATGTCACAGTTGATCATGAGACTGGAAAAGAACTTTTCTACTATTTTGTGGAGTCTCCCTCTAACTCTTCCACTAAACCTTTAATATTGTGGCTCAATGGAGGACCTGGTTGTTCTTCACTAGGGTATGGAGCCTTTGAGGAGCTAGGACCCTTCAGAATCAACTCTGATGGAAAAACTCTATACCGTAATCCATATGCTTGGAATGAAGTTGCAAATATACTTTTCTTGGAATCTCCAGCAGGAGTAGGCTTTTCCTACTCAAACACCACTTCTGACTATGAAAAATCAGGAGATAAGACAACTGCCAACGATGCCTATATCTTCCTAATCAACTGGTTGGAGAGATTTCCAGAGTACAAAACAAGAGAATTTTACATAACTGGAGAGAGTTATGCTGGTCACTATGTTCCTCAGCTTGCATCCACTATTCTTTACAACAATAAACTCTCTAACCAAACCAATATTAACCTCAAAGGCATTTCTATAGGAAATGCTTGGATTGATGATGCTACAAGTTTAAAAGGGCTATTTGATTACCTTTGGACTCATGCTTTGAACTCAGATCAAACTCATGAGTTGATCGACAAGTACTGTGACTTCACTTCCGAAAATGTTTCAGCAATATGTGCCAATGCAACCACAAAGGCCTTAATCGAGAAAGGAAAGATAGATTTCTATAACATCTATGCTCCACTTTGTCATGATTCTTCTCTCAAAAATGCTTCAACTGGCTATGTAAGCAATGAATTTGACCCTTGTTCTGATTACTATGGTATTGCCTATCTAAATACACCAGAGGTCCAAAAGGCTCTTCATGCAAAACCTACAAATTGGACCCATTGCACTCGTGTCATTCGTACTTGGAAAGACAGTCCAGTTACCATCCTCCCCACCATCAAGTACCTCATTGACAGTGGCATTAAATTATGGATATACAGTGGTGATACAGATGCAAGGGTACCAGTGACATCTTCAAGATATTCAATCAACACTCTTAAGCTTCCTATCAACTCTGCTTGGCGTCCATGGTACTCCGGACAAGAGATTGGAGGATATGTTGTGGGATACAAAGGACTGACATTTGTGACAGTAAGAGGAGCAGGACATCTTGTTCCAAGCTGGCAGCCGGAACGAGCTTTGACTTTGATCTCATCATTCATCTATGGAATTCTGCCTCCTGTTTCACCATCAAATTAA 1485 0.4027 MKKVSLYACLLLNLSLLAIVPYSKASQADKLDELILSRSSQNPPKTFTWAAEDALQTQSSSSAYVVPPQEEQRLADKIVTLPGQPYGVNFDHYSGYVTVDHETGKELFYYFVESPSNSSTKPLILWLNGGPGCSSLGYGAFEELGPFRINSDGKTLYRNPYAWNEVANILFLESPAGVGFSYSNTTSDYEKSGDKTTANDAYIFLINWLERFPEYKTREFYITGESYAGHYVPQLASTILYNNKLSNQTNINLKGISIGNAWIDDATSLKGLFDYLWTHALNSDQTHELIDKYCDFTSENVSAICANATTKALIEKGKIDFYNIYAPLCHDSSLKNASTGYVSNEFDPCSDYYGIAYLNTPEVQKALHAKPTNWTHCTRVIRTWKDSPVTILPTIKYLIDSGIKLWIYSGDTDARVPVTSSRYSINTLKLPINSAWRPWYSGQEIGGYVVGYKGLTFVTVRGAGHLVPSWQPERALTLISSFIYGILPPVSPSN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi315g00018 494 Gene3D alpha/beta hydrolase 73 331 IPR029058 -
Vivi315g00018 494 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
Vivi315g00018 494 FunFam Carboxypeptidase 391 485 - -
Vivi315g00018 494 Pfam Serine carboxypeptidase 82 484 IPR001563 GO:0004185|GO:0006508
Vivi315g00018 494 Gene3D - 391 485 - -
Vivi315g00018 494 SUPERFAMILY alpha/beta-Hydrolases 76 487 IPR029058 -
Vivi315g00018 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Vivi315g00018 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 182 IPR001563 GO:0004185|GO:0006508
Vivi315g00018 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 171 IPR001563 GO:0004185|GO:0006508
Vivi315g00018 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Vivi315g00018 494 ProSitePatterns Serine carboxypeptidases, histidine active site. 455 472 IPR033124 GO:0004185
Vivi315g00018 494 Gene3D - 349 383 - -
Vivi315g00018 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 78 472 IPR001563 GO:0004185|GO:0006508
Vivi315g00018 494 FunFam Carboxypeptidase 72 331 - -
Vivi315g00018 494 FunFam Carboxypeptidase 348 486 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi315g00018 346 485 Calmodulin-binding Proteins AT2G22960 30.201 9.85e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi315g00018 K16297 - mtr:11443022 854.744