Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi315g00017 ATGATATATAGAAACCAAGTTGAGAATAAGATGAAGATGGTTTCTCTTTATGCTTGCTTATTACTCAACTTGACTCTTTTGGCTATTGTTCCACATAGCAAGGCTAGTCAAGCTGATAAACTTGATGAGTTGATTCTGTCTAGAAGCTCACAAAATCCTCCTAAGACTCTTTCATGGGAAGAAGAAGATACAGTGAAAACACAGTCTTCTTCTGCTTATGTTGTACCTCCTCAAGAGGAGCGAAGACTAGCTGACAAGATTGTCACATTGCCTGGTCAACCCTATGGAGTTAATTTTGACCAATACTCAGGCTATGTCACAGTTGATCATGAGGCTGGAAGAGAACTTTTCTACTATTTTGTGGAGTCTCCATATAACTCATCAACTAACCCTTTAGTATTGTGGCTCAATGGAGGACCTGGTTGTTCCTCATTGGGGTATGGAGCCTTCGAGGAGCTAGGACCCTTCAGAATCAACTCTGATGGAAAAACTCTATACCGGAACCCATATGCTTGGAATGAAGTTGCAAATGTACTTTTCTTGGAATCTCCAGCAGGAGTAGGCTTTTCCTACTCAAACACAACTTCTGATTATGCAAAATCAGGAGATAAGACAACTGCAAAGGATGCTTATGTCTTCCTTATCAACTGGTTGGAGAGATTTCCGCAATACAAAACAAGAGATTTTTACATAACTGGAGAGAGTTATGCTGGTCACTATGTTCCTCAACTTGCATCCACTATTCTTCACAACAATAAACTCCTTAATCAAACCATTATCAACCTTAAAGGAATTTCAATAGGGAATGCTTGGGTTGATGATGCAACAGGTTCAAAGGGGTTATTTGACTACTTTTGGACCCATGCTTTGAATTCAGATCAAACTCATGAGTTGATTGACAAGTACTGTGACTTCACTTCTCAAAATGATTCAGCAATATGTGCCAATGCAACCGCAAAGGCCTTAATCGAAAAAGGAAAGATAGATTTCTATAACATCTATGCTCCACAATGTCATGATTCTTCTCTCAAAAATGGCTCAACTGGTTATGTGAGTAATGATTTTGATCCTTGTTCTGATTACTATGGTATTGCCTATCTAAATACACCAGAGGTTCAAAAGGCTCTTCATGCAAAACCTACAAATTGGAGTCATTGCGGTGATCTTATTACTAAATGGAATGACAGTCCAATCACCATCCTACCCACCATCAAGTATTTGATCGATAGCGGCATTAGATTATGGATATACAGTGGTGATACAGATGCAAGAGTTCCGGTCACAACTTCAAGATATGCAATCAATACTTTTAAACTTCCTATCAACTCCGCTTGGCGTCCATGGTACTCCGGAAAAGAGATTGGAGGATATGTGGTGGGGTACAAAGGATTAACATTTGTTACAGTAAGAGGAGCAGGTCATCTTGTTCCAAGCTGGCAACCAGAACGAGCTTTGACATTGATCTCGTCATTCATCTATGGAATTCTACCTCCTGTTTCACCATCAAATTAA 1512 0.3948 MIYRNQVENKMKMVSLYACLLLNLTLLAIVPHSKASQADKLDELILSRSSQNPPKTLSWEEEDTVKTQSSSAYVVPPQEERRLADKIVTLPGQPYGVNFDQYSGYVTVDHEAGRELFYYFVESPYNSSTNPLVLWLNGGPGCSSLGYGAFEELGPFRINSDGKTLYRNPYAWNEVANVLFLESPAGVGFSYSNTTSDYAKSGDKTTAKDAYVFLINWLERFPQYKTRDFYITGESYAGHYVPQLASTILHNNKLLNQTIINLKGISIGNAWVDDATGSKGLFDYFWTHALNSDQTHELIDKYCDFTSQNDSAICANATAKALIEKGKIDFYNIYAPQCHDSSLKNGSTGYVSNDFDPCSDYYGIAYLNTPEVQKALHAKPTNWSHCGDLITKWNDSPITILPTIKYLIDSGIRLWIYSGDTDARVPVTTSRYAINTFKLPINSAWRPWYSGKEIGGYVVGYKGLTFVTVRGAGHLVPSWQPERALTLISSFIYGILPPVSPSN 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi315g00017 503 Gene3D alpha/beta hydrolase 82 340 IPR029058 -
Vivi315g00017 503 SUPERFAMILY alpha/beta-Hydrolases 85 496 IPR029058 -
Vivi315g00017 503 ProSitePatterns Serine carboxypeptidases, histidine active site. 464 481 IPR033124 GO:0004185
Vivi315g00017 503 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 87 481 IPR001563 GO:0004185|GO:0006508
Vivi315g00017 503 FunFam Carboxypeptidase 81 340 - -
Vivi315g00017 503 Gene3D - 358 391 - -
Vivi315g00017 503 ProSitePatterns Serine carboxypeptidases, serine active site. 231 238 IPR018202 GO:0004185
Vivi315g00017 503 Pfam Serine carboxypeptidase 91 493 IPR001563 GO:0004185|GO:0006508
Vivi315g00017 503 Gene3D - 400 494 - -
Vivi315g00017 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 217 242 IPR001563 GO:0004185|GO:0006508
Vivi315g00017 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 191 IPR001563 GO:0004185|GO:0006508
Vivi315g00017 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 180 IPR001563 GO:0004185|GO:0006508
Vivi315g00017 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Vivi315g00017 503 FunFam Carboxypeptidase 400 494 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi315g00017 355 494 Calmodulin-binding Proteins AT2G22960 30.137 1.95e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi315g00017 K16297 - mtr:11443022 889.797