Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi315g00016 ATGATATATAGAAACCAAGTTGAGAATAAGATGAAGATGGTTTCTCTTTATGCTTGCTTATTACTCAACTTGACTCTTTTGGCTATTGTTCCACATAGCAAGGCTAGTCAAGCTGATAAACTTGATGAGTTGATTCTGTCTAGAAGCTCACAAAATCCTCCTAAGACTCTTTCATGGGAAGAAGAAGATACAGTGAAAACACAGTCTTCTTCTGCTTATGTTGTACCTCCTCAAGAGGAGCGAAGACTAGCTGACAAGATTGTCACATTGCCTGGTCAACCCTATGGAGTTAATTTTGACCAATACTCAGGCTATGTCACAGTTGATCATGAGGCTGGAAGAGAACTTTTCTACTATTTTGTGGAGTCTCCATATAACTCATCAACTAACCCTTTAGTATTGTGGCTCAATGGAGGACCTGGTTGTTCCTCATTGGGGTATGGAGCCTTCGAGGAGCTAGGACCCTTCAGAATCAACTCTGATGGAAAAACTCTATACCGGAACCCATATGCTTGGAATGAAGTTGCAAATGTACTTTTCTTGGAATCTCCAGCAGGAGTAGGCTTTTCCTACTCAAACACAACTTCTGATTATGCAAAATCAGGAGATAAGACAACTGCAAAGGATGCTTATGTCTTCCTTATCAACTGGTTGGAGAGATTTCCGCAATACAAAACAAGAGATTTTTACATAACTGGAGAGAGTTATGCTGGTCACTATGTTCCTCAACTTGCATCCACTATTCTTCACAACAATAAACTCCTTAATCAAACCATTATCAACCTTAAAGGAATTTCAATAGGGAATGCTTGGGTTGATGATGCAACAGGTTCAAAGGGGTTATTTGACTACTTTTGGACCCATGCTTTGAATTCAGATCAAACTCATGAGTTGATTGACAAGTACTGTGACTTCACTTCTCAAAATGATTCAGCAATATGTGCCAATGCAACCGCAAAGGCCTTAATCGAAAAAGGAAAGATAGATTTCTATAACATCTATGCTCCACAATGTCATGATTCTTCTCTCAAAAATGGCTCAACTGGTTATGTGAGTAATGATTTTGATCCTTGTTCTGATTACTATGGTATTGCCTATCTAAATACACCAGAGGTTCAAAAGGCTCTTCATGCAAAACCTACAAATTGGAGTCATTGCGGTCCAATCACCATCCTACCCACCATCAAGTATTTGATCGATAGCGGCATTAGATTATGGATATACAGTGGTGATACAGATGCAAGAGTTCCGGTCACAACTTCAAGATATGCAATCAATACTTTTAAACTTCCTATCAACTCCGCTTGGCGTCCATGGTACTCCGGAAAAGAGATTGGAGGATATGTGGTGGGGTACAAAGGATTAACATTTGTTACAGTAAGAGGAGCAGGTCATCTTGTTCCAAGCTGGCAACCAGAACGAGCTTTGACATTGATCTCGTCATTCATCTATGGAATTCTACCTCCTGTTTCACCATCAAATTAA 1485 0.3966 MIYRNQVENKMKMVSLYACLLLNLTLLAIVPHSKASQADKLDELILSRSSQNPPKTLSWEEEDTVKTQSSSAYVVPPQEERRLADKIVTLPGQPYGVNFDQYSGYVTVDHEAGRELFYYFVESPYNSSTNPLVLWLNGGPGCSSLGYGAFEELGPFRINSDGKTLYRNPYAWNEVANVLFLESPAGVGFSYSNTTSDYAKSGDKTTAKDAYVFLINWLERFPQYKTRDFYITGESYAGHYVPQLASTILHNNKLLNQTIINLKGISIGNAWVDDATGSKGLFDYFWTHALNSDQTHELIDKYCDFTSQNDSAICANATAKALIEKGKIDFYNIYAPQCHDSSLKNGSTGYVSNDFDPCSDYYGIAYLNTPEVQKALHAKPTNWSHCGPITILPTIKYLIDSGIRLWIYSGDTDARVPVTTSRYAINTFKLPINSAWRPWYSGKEIGGYVVGYKGLTFVTVRGAGHLVPSWQPERALTLISSFIYGILPPVSPSN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi315g00016 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 87 472 IPR001563 GO:0004185|GO:0006508
Vivi315g00016 494 Gene3D - 358 389 - -
Vivi315g00016 494 Gene3D alpha/beta hydrolase 82 340 IPR029058 -
Vivi315g00016 494 FunFam Carboxypeptidase 81 340 - -
Vivi315g00016 494 SUPERFAMILY alpha/beta-Hydrolases 85 487 IPR029058 -
Vivi315g00016 494 ProSitePatterns Serine carboxypeptidases, histidine active site. 455 472 IPR033124 GO:0004185
Vivi315g00016 494 ProSitePatterns Serine carboxypeptidases, serine active site. 231 238 IPR018202 GO:0004185
Vivi315g00016 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 217 242 IPR001563 GO:0004185|GO:0006508
Vivi315g00016 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Vivi315g00016 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 180 IPR001563 GO:0004185|GO:0006508
Vivi315g00016 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 191 IPR001563 GO:0004185|GO:0006508
Vivi315g00016 494 Gene3D - 391 485 - -
Vivi315g00016 494 FunFam Carboxypeptidase 391 485 - -
Vivi315g00016 494 Pfam Serine carboxypeptidase 91 484 IPR001563 GO:0004185|GO:0006508
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi315g00016 355 485 Calmodulin-binding Proteins AT2G22960 29.655 1.22e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi315g00016 K16297 - mtr:11443022 864.759