Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi315g00007 ATGGCCGTGAAACAATATATAGGTTCTTCTTCTTCATCTATGGTGGCATCATTGAAAAAATTCGATGTTTTTATTAGCTTTCATGGCAAGGATACTCGTAAAACTATCACGAGCCATCTTTATGAAGCTCTTAGGAAAAAAGTTCAGACATTTATTGACTTTGAGCTTGAAAAAGGAGATGAGATCTCATCAGCACTCAACAAAGCTATTGAGGAGTCAGACGCATCTGTAGTCATATTTTCAAAACACTATGCATCTTCAAAATGGTGTTTGAATGAACTCGTTAAGATTCTAGAATGCAAGAGAGATCGAAGACAAATTGTCATACCCGTTTTCTATGATATAGAACCATCTCATGTGAGGAATCAAACTGGAAGTTATAAGCAAGCTTTTGAAAAACATGAGCGAGATTTGAGACACAACAAAGAGAAGTTGCAGAAATGGAAAAATGCACTCACCGAAGCAGCCAATTTATCTGGATGGAACTCTCAAAATTACGGGAATGATGCAGATTTCGTTAATGACGTTGTAGAAGATGTTTTGGAAAAATTGTATCGGAAATATCCATTTGAAGTTAATAAGGAACTTGTTGGCATTGAGAAAAAGTGTGAAAAGATGGAATCTTTACTGGAAATTGGGTCAAATGATGTTAGAACCCTTGTATTATGGGGCATGGGAGGCATAGGAAAGACCACTCTAGCCAAACATTTATTTGCTAAGCAGTATGCTCAATTTGAACGTACTTGCATCATTGAAAATATAAGGGAAGAATCAACCAAGCATGGACCCACGTTTGTACGTAGCAAACTAATTTCTACATTGTTGAAGCTTCCTCTCAATGCACCTTATGTAGAAACACCAAATTTCATAAATAGACTTGCACATGGAAGAAGTCTCATTGTGTTGGATGATGTGGAAACCTTTGAGCAAGCAGAAAATGTTAACATAGTTAATAATTGCTTGGGAGAGGGTAGTAGAGTCATTATCACCACTAGAAATAAGCAGATATGTAACCTACTTGACAAATATGAAATATATGAGTTTGAGAAAATGAATGCAGATGAATCACTTCAATTATTCTGTTTGAAAGCTTTTGGAGAAAAATTTCCTAAGGAAGGATATGATAATCTATCAGAAGAGGCAATTCTTTATTGCAGTGGCAATCCCCTAGCTTTGAAAGTCTTAGGTGCAAATTTTGGCGCAAAAAAAAGTAAAGAAGCATGGGAAAGTGAGTTGGAGAAACTCAAAAAAAATCCCAATCGGAATATCCATGATGTGTTAAAATTGAGTTTTGATGGCTTAGATCGTCCTCAACAAGACATATTTCTAGACATTGCATGCATCTCCGGATTACAAGCTTGTTATGAATCTCTTGATAGTAAAGATTACTTCAAAGCAGTATGGAATGCTTGCAAATTTTTTGCAGACAGTGGATTAGAAGTCCTTCTAGATAAAGCGCTCATATATGTTTATGACGAACGCTATATCAATATGCATGATTTGTTAAAAGAAATGGGAAAAGAGATTGTTATGACAGAATCTGTTAAAGACCCGGGAAGAAGAAGTCGATTATGGGATCAAAATGATGTGTATGATGTATTGAAATATAACAAGGGAACTGAAGTTGTTGAAGTTATAGAATTTAATATTGATCGACTTGGGGATTTGTACTTGAGCTCTGATTGCTTTAAAAGCATGACCAGCTTAAGACATCTTGAGATCACTATAGGTTATAACAGTAGACTGCATCTCCTTGAAGGTCTTGAATGGCTGTCTGAGAAATTGAGGTACATTCGTTGGCAATCATTCCCACTTGAGTCTTTGCCATCAACCTTTGGTGGAAAATGGCTTGTACATCTTACAATGCAGCATAGCAAGCTTAAAAAGCTTTGGGATGGAATTCAGAGGCTTGACAATTTAATGATTCTTGATCTTGATCACTCCAAAGACCTGATTGAGATTCCAGATTTATCAAGGGCCCCAAATCTTCAAGTAGTATCCCTTTGTTATTGTGTGAGTCTCTGTCAACTCCATCCATCCATTTTTAGTGCCCCCAAGCTTAAAGAACTATGTTTACATGGTTGCAAAAAGATTCAAAGCCTGAAAAATCACATTTATTCAACATCTCTCCAAATACTTAATCTCTCTGATTCTTCATATCTTGCGGAATTTTCGGTGACATCGGAGGAAATGATGGAGTTGTCTTTATGGGGCAGTGTTGTACATGGATTTTCTTCATTGATGTTGTGTAATAAGAAATTTACTGAACTGCACCTTACAGGATGCACACAGATCAATACATCGAGTCTTTGGCTCATCCTTGATGGCACACCCTCTTTAAAAGAACTATATTTGAGCAAGTGCTGCTACTTAGAGTTTCTCCCTGACAACATCCAAAACAATTCTATGTTAGAAATTCTTTATTTAAATGACTGCCGGACACTCAAGTCCCTACCAAAACTTCCAGTTAGCATGCGAAGCTTTAGAGCACAGAATTGCATTCATTTGGACACTCTCTCCATTCAACAATCAATACATGAGAATATGTTACACAGACTCCGTTCACATGAGAAAATGTTACACAACAGATACTGTTCACGGAGCTACTGGAATGTAACAAATTGTCCTATGGATTTATGTTTCTCTCCAGGTGGTGAAGTTCCTAGTGAGTTTTATTTTCATACAACAAAGGATTCCATAGTTATTCCTCCTATTCCAAAATATGGTTTGTATGGTTTTGTCTTTTGCATCATTCTCTCTGAAGAAGTGGCTAATCAACTCTGGGAAGTTTTGTGTATTATTTATCAACACACACAAGAAATTGACCGATACTCGAAATGCTTTTGGGAAGGTACTTTAATTTCAGATCATGTATTGATAGGCTGCATAGGATGTTACAATTCCGACTGGGTGAAGGCGGGGATGGAAAGTGAAGGTCATCATTACAACCTTTCATTTCAATTCATATATCGTGGAAGTGAAGGTATGAGAACAGGGTGGGTCAAGAGTTGTGGAATAATCCCTGTATATGACTTGAAACATAGTTTTGCTTTGGATGGTAGAATTAGTGGAGTTGAGATTGTTGAAATACAATCCAACGCTCAACTATCTGATCATTCTGATGATTGTCATGGACATTTGAAATTCGATATTAATGAGTCACAACCCCAAAAAATTGGAGCTGAAAATGAAGATGGCCAGCAACAGCTAATTATTCCTCCGACAGAAAATATGGAGTTGAATGATAAATCTTCCTGTGCATGTTCAATCGGTATTTTGTTGAAGTACATACTAGAAGAATCAAAACGTCTATTTCTCAAGCAAAGATAA 3330 0.3664 MAVKQYIGSSSSSMVASLKKFDVFISFHGKDTRKTITSHLYEALRKKVQTFIDFELEKGDEISSALNKAIEESDASVVIFSKHYASSKWCLNELVKILECKRDRRQIVIPVFYDIEPSHVRNQTGSYKQAFEKHERDLRHNKEKLQKWKNALTEAANLSGWNSQNYGNDADFVNDVVEDVLEKLYRKYPFEVNKELVGIEKKCEKMESLLEIGSNDVRTLVLWGMGGIGKTTLAKHLFAKQYAQFERTCIIENIREESTKHGPTFVRSKLISTLLKLPLNAPYVETPNFINRLAHGRSLIVLDDVETFEQAENVNIVNNCLGEGSRVIITTRNKQICNLLDKYEIYEFEKMNADESLQLFCLKAFGEKFPKEGYDNLSEEAILYCSGNPLALKVLGANFGAKKSKEAWESELEKLKKNPNRNIHDVLKLSFDGLDRPQQDIFLDIACISGLQACYESLDSKDYFKAVWNACKFFADSGLEVLLDKALIYVYDERYINMHDLLKEMGKEIVMTESVKDPGRRSRLWDQNDVYDVLKYNKGTEVVEVIEFNIDRLGDLYLSSDCFKSMTSLRHLEITIGYNSRLHLLEGLEWLSEKLRYIRWQSFPLESLPSTFGGKWLVHLTMQHSKLKKLWDGIQRLDNLMILDLDHSKDLIEIPDLSRAPNLQVVSLCYCVSLCQLHPSIFSAPKLKELCLHGCKKIQSLKNHIYSTSLQILNLSDSSYLAEFSVTSEEMMELSLWGSVVHGFSSLMLCNKKFTELHLTGCTQINTSSLWLILDGTPSLKELYLSKCCYLEFLPDNIQNNSMLEILYLNDCRTLKSLPKLPVSMRSFRAQNCIHLDTLSIQQSIHENMLHRLRSHEKMLHNRYCSRSYWNVTNCPMDLCFSPGGEVPSEFYFHTTKDSIVIPPIPKYGLYGFVFCIILSEEVANQLWEVLCIIYQHTQEIDRYSKCFWEGTLISDHVLIGCIGCYNSDWVKAGMESEGHHYNLSFQFIYRGSEGMRTGWVKSCGIIPVYDLKHSFALDGRISGVEIVEIQSNAQLSDHSDDCHGHLKFDINESQPQKIGAENEDGQQQLIIPPTENMELNDKSSCACSIGILLKYILEESKRLFLKQR 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi315g00007 1109 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Vivi315g00007 1109 SUPERFAMILY L domain-like 548 876 - -
Vivi315g00007 1109 PRINTS Disease resistance protein signature 292 306 - -
Vivi315g00007 1109 PRINTS Disease resistance protein signature 385 399 - -
Vivi315g00007 1109 PRINTS Disease resistance protein signature 635 651 - -
Vivi315g00007 1109 PRINTS Disease resistance protein signature 219 234 - -
Vivi315g00007 1109 Pfam Leucine Rich Repeat 617 635 IPR011713 -
Vivi315g00007 1109 ProSiteProfiles TIR domain profile. 19 184 IPR000157 GO:0007165
Vivi315g00007 1109 Gene3D - 350 435 IPR042197 -
Vivi315g00007 1109 Gene3D - 187 345 IPR027417 -
Vivi315g00007 1109 Gene3D Ribonuclease Inhibitor 533 724 IPR032675 -
Vivi315g00007 1109 Gene3D - 18 186 IPR035897 -
Vivi315g00007 1109 Coils Coil 398 418 - -
Vivi315g00007 1109 Coils Coil 131 151 - -
Vivi315g00007 1109 SMART till_3 20 158 IPR000157 GO:0007165
Vivi315g00007 1109 Pfam NB-ARC domain 207 421 IPR002182 GO:0043531
Vivi315g00007 1109 SUPERFAMILY "Winged helix" DNA-binding domain 422 535 IPR036390 -
Vivi315g00007 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 445 IPR027417 -
Vivi315g00007 1109 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 838 IPR044974 GO:0006952
Vivi315g00007 1109 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 186 - -
Vivi315g00007 1109 Pfam TIR domain 20 197 IPR000157 GO:0007165
Vivi315g00007 1109 Gene3D Ribonuclease Inhibitor 725 865 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi315g00007 16 845 WRKY Transcription Factor Family AT4G12020 28.251 3.70e-79 283