Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi315g00001 ATGGCACCACCAAAACGACTCCGCATCACTCCGCTCGATGATCCACCCACCGCCTACTCCTCCGATGACGACCAACCGCCTTCCTCCAAAAAGCCAGAAGATGAAGTAGTCGATGAAGAAGAAGTTTCAGAAGAAGGAGAAGAAACTGATCAGAATGAAGAAGATGAAGAAGAAGAAGAAGGTTCTTCATCCGAAGAAGAACAAGTTCAACCTCCTTCCAAAAATCCTCCACCTTCTACCCCAATCTCAAACCCTAAACCCGAGTCCGGTTCCGAATCGGAGTCTGGTGCCGAATCCGGATCTGAATCTGATTCTGAACAAGAACCTACTCCACCTAACGCCAAAGTCAAGCCTCTCGCATCAAAGCCCATGAAAGCCCAACCACAAGCCCAATCTACTCCCGTACCGGCCAGATCTGGAACAAAGCGTGCCAACGAAAACGGTTCCAAACCTGCTAAGAAGAAAACAATCGCCGCTGGCGGCGGTGGTGGTTCTGAGAACGAAGCGGATGGAGACGGTGACGTGAAAATGACCGGGGAAGACTCTAAGAAGATGAATCCGAGAGTCTTCACTGAAGAAGATGAGATTGCCATTCTGAAAGGTCTCGCTGACTTCATTTCCAAAACTGGTAATGATCCGATGAAGGACCTGGTGGCATTTCATAGGTTTGTGAAGAAATCTATTCATGGTGATGCGACTAGCGAACAGCTGAAGCGGAAGGTTCGTGGTTTGAAGATGAAGTTCAAAGACGGTGGTAGTTTTACTAAAGAGCATGATAAGAGAGCTTTTGAACTTTCCAAAAAGGTTTGGGGCAATACTGAAGGCAATAATGGAGGCAATGAAGGGGAAGAAAATGGGAAAGTGAATGAGAAAACTCCGAAGAGTACTAAGAAGGAAGCTCCTGTGAGAAACAATTGTTCTGCTAAGAAAGAAGTAGTTGCCAAGAATGGTGCTGGAAAAGATGAGGGTGTTGTTGATAAAAGCTTGGCTTTGAGTGAAATGTGTAAATTTGGTGAAGCTGCGGGGTTATCCTTGTTGAACAAGGCTATGGAGAGGGGAATGGGATTGTTGGAGGAGTCTAAGGCTGATGAGTTTGATGAGAGATGGAGAAAGGTTCAAATTGCGGAGATGGAACTGTCTGTGACTCGAGGGCAACTGCTCAAGGATCAGATTAGGATAGCATTGGAGGCGTTGAAGAAGAAGTCTATCAATTAG 1215 0.4626 MAPPKRLRITPLDDPPTAYSSDDDQPPSSKKPEDEVVDEEEVSEEGEETDQNEEDEEEEEGSSSEEEQVQPPSKNPPPSTPISNPKPESGSESESGAESGSESDSEQEPTPPNAKVKPLASKPMKAQPQAQSTPVPARSGTKRANENGSKPAKKKTIAAGGGGGSENEADGDGDVKMTGEDSKKMNPRVFTEEDEIAILKGLADFISKTGNDPMKDLVAFHRFVKKSIHGDATSEQLKRKVRGLKMKFKDGGSFTKEHDKRAFELSKKVWGNTEGNNGGNEGEENGKVNEKTPKSTKKEAPVRNNCSAKKEVVAKNGAGKDEGVVDKSLALSEMCKFGEAAGLSLLNKAMERGMGLLEESKADEFDERWRKVQIAEMELSVTRGQLLKDQIRIALEALKKKSIN 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi315g00001 404 PANTHER BNAANNG10740D PROTEIN-RELATED 51 397 IPR007592 GO:0006355
Vivi315g00001 404 MobiDBLite consensus disorder prediction 85 110 - -
Vivi315g00001 404 MobiDBLite consensus disorder prediction 284 298 - -
Vivi315g00001 404 MobiDBLite consensus disorder prediction 1 189 - -
Vivi315g00001 404 MobiDBLite consensus disorder prediction 169 189 - -
Vivi315g00001 404 MobiDBLite consensus disorder prediction 266 305 - -
Vivi315g00001 404 Pfam Protein of unknown function, DUF573 187 271 IPR007592 GO:0006355
Vivi315g00001 404 MobiDBLite consensus disorder prediction 125 146 - -
Vivi315g00001 404 MobiDBLite consensus disorder prediction 37 65 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi315g00001 75 399 GeBP Transcription Factor Family AT4G00390 29.032 1.95e-22 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi315g00001 DUF573 2.6e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi315g00001 - - vvo:131633905 477.633