Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi313g00027 ATGAAGTGCTTCCATTTCTCCAACGGAGGATCAGAGAAACGAGGAGTCGTAGCCGAAGACGAAGAAGGTTCAGCCTCAAGCTCAAGAGGCTCACGCGTCTCATGGGCGCGTTCCCTAAGCTTAATGGACTCACGCCGTTCCGAATACGACTCCGATTCAAGAGACTTCTCCGACACGCTCGGCTTCCACGAGTTTCTCTCTCAACGCCGTGCCAATCACCTCGTTCTCTTCTCTTTCTCTGACCTTAAAACCGCCACTCGCGGCTTCAATAGAGCTCTCTTGATCGGCGAAGGTGGCTTCGGGTCTGTCTATAGAGGAACCTTAAATCATCACTCTCATCGTTCCCAAATTGATGTTGCTGTTAAACAATTGAATCGTAACGGTCACCAGGGGCATAAGGAGTGGATTAATGAAGTGAATTTGTTAGGGGTGATTAAGCATCCGAATTTGGTAAGGTTGGTTGGTTATTGTGCTGAAGATGATGAAAGAGGGATTCAGAGGCTTTTGGTTTATGAGTTTATGCCTAATAAGAGCTTGGAGGATCATCTTTTGGCTCGTGTTCCTTCATCGGTTCTTTCTTGGATTACGAGATTGAAGATTGCTCAAGATGCAGCTCGTGGTTTGGCTTACCTACATGAAGAAATGGATTTTCAGCTAATATTTCGAGATTTTAAAACATCCAACATCTTGCTGGATGAGGACTTCAATGCAAAGCTTTCAGATTTTGGACTCGCTAGGCAAGGACCCTCAGAAGGGTCTGGCTATGTTTCAACAGCAGTTGTTGGCACCATAGGATATGCTGCACCAGAGTATGTTCATACTGGTAAGCTGACTGCTAAGAGTGATGTCTGGAGCTTTGGCGTAGTTCTTTATGAGCTTATCACTGGGAGGAGAGCCGTAGAAAGAAACTTACCTAGAAATGAACAAAAGCTTTTGGAGTGGGTAAGATCTTATGTATCGGATTCTAAGAAGTTCCATCATATTGTCGATCCTCGGCTTGAGGGACAGGATTGCACCAAATCAGCTCAAAAACTTGCAATCCTAGCAAACAAGTGTCTAATGAAGCAGCCAAGGTCTCGCCCAAAAATGAGCGAGGTGGTTGAGATTCTTGACAACATTATCAACGAGACCGTTCCTGCGGATGAATGCATTTCCCAAGCTGTTGCAGAAACTGGAGAAGGAAAAGAAGTAAATTTATCTGTAGAGGATGCCGAGAGGGAACCAGCTAAACAGGGGAGTAGTTATCTGAAGAAGGTTATTGAATTCAGAGACATGGTCAGCTTAAGAAATAAATCCATTGGAAGATTTGATTGGAAAAGTTGGGCACCTGGCCTTGTAAGAACTTGGTGA 1350 0.4474 MKCFHFSNGGSEKRGVVAEDEEGSASSSRGSRVSWARSLSLMDSRRSEYDSDSRDFSDTLGFHEFLSQRRANHLVLFSFSDLKTATRGFNRALLIGEGGFGSVYRGTLNHHSHRSQIDVAVKQLNRNGHQGHKEWINEVNLLGVIKHPNLVRLVGYCAEDDERGIQRLLVYEFMPNKSLEDHLLARVPSSVLSWITRLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDFNAKLSDFGLARQGPSEGSGYVSTAVVGTIGYAAPEYVHTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRSYVSDSKKFHHIVDPRLEGQDCTKSAQKLAILANKCLMKQPRSRPKMSEVVEILDNIINETVPADECISQAVAETGEGKEVNLSVEDAEREPAKQGSSYLKKVIEFRDMVSLRNKSIGRFDWKSWAPGLVRTW 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi313g00027 449 ProSiteProfiles Protein kinase domain profile. 89 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi313g00027 449 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 174 382 - -
Vivi313g00027 449 Gene3D Transferase(Phosphotransferase) domain 1 174 390 - -
Vivi313g00027 449 CDD STKc_IRAK 95 373 - -
Vivi313g00027 449 Pfam Protein tyrosine and serine/threonine kinase 95 370 IPR001245 GO:0004672|GO:0006468
Vivi313g00027 449 MobiDBLite consensus disorder prediction 1 29 - -
Vivi313g00027 449 Gene3D Phosphorylase Kinase; domain 1 60 173 - -
Vivi313g00027 449 SUPERFAMILY Protein kinase-like (PK-like) 71 370 IPR011009 -
Vivi313g00027 449 ProSitePatterns Protein kinases ATP-binding region signature. 95 122 IPR017441 GO:0005524
Vivi313g00027 449 PANTHER OS01G0588500 PROTEIN-RELATED 49 373 - -
Vivi313g00027 449 FunFam Serine/threonine-protein kinase BIK1 61 173 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi313g00027 77 370 Glycoside Hydrolase AT3G07070 51.186 6.73e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi313g00027 PK_Tyr_Ser-Thr 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi313g00027 - - gmx:100811825 702.975