Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi313g00019 ATGATTGATAACCAAAATCTATTAGTATCTTCAGAGATGGATCCTCGTTTCAAATTCAACCAAAATCCCAATTCAATGGATGCTGAAGATCACACCTTTGGCTTCATAGACGATCTTTTTCTTCTTCCATCACCTGACCCAAACAACACTTCAATCTCCACCATAACTACCGCAGAAGAAGATTCACCTTTAGATGATACCGATTTCTCTGCTACTGTTCTGCGTTACATAAACCAAATGCTTATGGAAGAAGACATGGAGAAGAAACCATGCATGTTTCATGATCCATTGGCTTTACAAGCTGCTGAGAAATCTTTCTATGAAGTCATTGGTGAGACATACCCTTGTTCTTCTGCTTCTGGTTCTGTTCAAAATCATCACAATGTGGAGAGTCCTGATTGTGGTACCACTACTAGTACTAGTGGTAGTAGTTCTGTTGAGTTTGAATCGAATTGGAGTAATTTTGATGTTTCTGAGTACAAGCCTTCGATATTGCAAACCAGTTTTCCTTCTGATTTTGTTTTTCAAGCTAGTTCTGTGAATGGGACTAGCATTAGCAGTAGAAATTTCGGTTTAGCTAATAATGGGTTTTTAGTAAATTCTAAGGATGGATTTCCTGATGATAAATTGCTGAGTAAGACTGAGTCTGTACTGCAATTTGAGAGGGGTGTGGAGGAAGCGAATAAGTTTCTTCCTAAAATGAATCCCTTGGTTATTGACCTGGAGAAGAAGAACGCTTTTATCCCTTCGTTTAGGAAGGTTCCTCAGGAGGTAGTAGTTAAGACGGAGAATAATGAAGGGGAATATTTTTCTGCTGAGGCGAGGGGGAGGAAGAATCATGAGCGAGGAGATGAAATGGATTTACAAGATGAGAGAAGTAATAAGCAGTCGGCTGTTTATACTGATGACAGTGAGCTAGAGCTATCAGAGTTGTTTGATAAGGTTTTGCTGGGGACAGGGTGCGGGAAGGACGGAGGTCCTACGTGTAATAGTAAGGAAGTGAAGGCTAATGGACTAGACACGAGTTTGCAGCAGAAAGAAGAAGTGAACAATTCTGGTGGTGGAAAGGGTCGTGGTAAGAAACAAGGTAACAAGAAAGGTGTTGTGGATCTGAGAACAATGTTGATTCTGTGTGCGCAATCTGTTTCTTCTGATGATCGTGTGACTGCTAAGGAGTTATTAAAGCAGATAAGGCAACACTCTTCTCTGCATGGTGATGGATCTCAGAGGCTGGCTCATTGCTTTGCGAATGCCCTTGAGGCTCGTTTGTCTGGCACAGGCACTCAGATTTATACTGCTTTATACTCCAAAAGAAACTCTTCTGCTGACATGGTGAAAGCTTACCAAATGTTTATTTCAGCCTGTCCATTCAAGAAACTTGCAATCATTTTTGCAAACCATACAATTTTGAATCTAGCCAGGGAAGTAGAAACAGTTCACATTGTGGATTTTGGCATCCGTTACGGCTTCCAATGGCCTGCCCTTATTTATCGTCTATCAAAACGGCCTGGTGGGCCTCCTAAGCTGCGCTTGACAGGGATAGAGCTCCCTCAACCTGGCTTCAGGCCTGCAGAGAGAGTTCAGGAGACAGGGCTTCGCTTGGCAAGGTATTGTGAACGTTTTAATGTTCCATTTGAGTTCAATGCTATTGCACAAAAATGGGAAACCATCAAAATTGAGGATTTGAAGATACAGAAAAATGAACTTCTTGTTGCGAACTGTATATGTCGTTTTAAAAATTTACTTGATGAGACCGTTGTGCTGAATAGTCCCAGGGATGCTGTTTTAAAATTAATTAGGAATTCGAAACCCAATATCTTTATACATACAACTGTCAATGGAAGCTATAATGCTCCATTCTTCGTGACACGGTTCAAGGAGGCTCTTTTCCATTACTCTACAATGTTTGATGTGCTTGACATCAATGTTGCTCGTGAAGATCCTATGAGGTTGATGTATGAGAAAGAGTTCTGTGGGCGGGAGGTAATGAATACTATAGCTTGTGAAGGTTCTGAGAGGGTTGAGAGGCCAGAGACATACAAGCAATGGCAGGTTCGGAACATAAGGGCTGGATTTAGGCAACTGCCCTTGGATAAACAACTCATTAACAAGTTAAGATGCAAGTTGAAAGATGTGTACCATAGTGATTTCATGCTTATTGAAGATGGGAACAGCATGCTGCAAGGTTGGAAGGGCCGAATAGTTTATGCTTCCTCCTGTTGGGTACCTGCATAG 2235 0.4152 MIDNQNLLVSSEMDPRFKFNQNPNSMDAEDHTFGFIDDLFLLPSPDPNNTSISTITTAEEDSPLDDTDFSATVLRYINQMLMEEDMEKKPCMFHDPLALQAAEKSFYEVIGETYPCSSASGSVQNHHNVESPDCGTTTSTSGSSSVEFESNWSNFDVSEYKPSILQTSFPSDFVFQASSVNGTSISSRNFGLANNGFLVNSKDGFPDDKLLSKTESVLQFERGVEEANKFLPKMNPLVIDLEKKNAFIPSFRKVPQEVVVKTENNEGEYFSAEARGRKNHERGDEMDLQDERSNKQSAVYTDDSELELSELFDKVLLGTGCGKDGGPTCNSKEVKANGLDTSLQQKEEVNNSGGGKGRGKKQGNKKGVVDLRTMLILCAQSVSSDDRVTAKELLKQIRQHSSLHGDGSQRLAHCFANALEARLSGTGTQIYTALYSKRNSSADMVKAYQMFISACPFKKLAIIFANHTILNLAREVETVHIVDFGIRYGFQWPALIYRLSKRPGGPPKLRLTGIELPQPGFRPAERVQETGLRLARYCERFNVPFEFNAIAQKWETIKIEDLKIQKNELLVANCICRFKNLLDETVVLNSPRDAVLKLIRNSKPNIFIHTTVNGSYNAPFFVTRFKEALFHYSTMFDVLDINVAREDPMRLMYEKEFCGREVMNTIACEGSERVERPETYKQWQVRNIRAGFRQLPLDKQLINKLRCKLKDVYHSDFMLIEDGNSMLQGWKGRIVYASSCWVPA 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi313g00019 744 ProSiteProfiles GRAS family profile. 362 742 IPR005202 -
Vivi313g00019 744 MobiDBLite consensus disorder prediction 334 351 - -
Vivi313g00019 744 Pfam GRAS domain family 371 741 IPR005202 -
Vivi313g00019 744 MobiDBLite consensus disorder prediction 273 300 - -
Vivi313g00019 744 MobiDBLite consensus disorder prediction 273 298 - -
Vivi313g00019 744 MobiDBLite consensus disorder prediction 332 364 - -
Vivi313g00019 744 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 289 735 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi313g00019 73 744 GRAS Transcription Factor Family AT1G07530 55.874 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi313g00019 GRAS 6e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi313g00019 - - mtr:11422027 1090.1