Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi313g00018 ATGGATCCAAACTTTCCTGAAGCTAGCAATTTCATAAAAGGCTATTACCACTTTGATGAAGAAGGAAACATAGTGGTCTCTGAGTCTGATCCAATTCAATATGATAACTTTCTTGATGCTGATCCAAATCAATATGATGGCTTCCTTGATGCTGGTTCAAATCAATATGATGGTTTTCTTGATGCTGATCCACTTGATTTTTCAGTTAATACTGTTCCTATGCAAGGTTCTTCTAGTGCCTCTGTGACAGACCCTTCCCTTGAAGACACTGATTTTTCAGATACAATTAAGTTCATAAGCCAAATCCTTATGGAAGAGGATGTTGACCGGAGACCATTTTACGACCCGGTTTTGCAAATTACTGAGAAATCATTCAATGATGCCCTCTTACACGAAAATAAACCTCTTTCCCCCAATCAACATCCTTTAGATATTCATAGCTCTGATGGAAGCACCAGCACCGGCACCGGCACCAGCACCAGCACCAGTAATAGTAATAGTAATAGCAGTATTGACGAATTTCGAGAGTCAAAACCCCTTTCCCCCGAAACTCCTGTTTCCGATCTTAGTAATAATGTTTTTCAGTTTAGTTCACCTGCAATCTCTCACTCTTTGTCTCGACCTAATACTACTAGTGTTAGTAATGGACTCAGAGATTTGGATTCTTCTATTACCAATATGTTGGCGCAAAACATTTTCAGTGATGCAGATTCAGTTTCCCTATTCAGGAAAGGTTTAGAAGAAGCCAACAAGTTTCTTCCTCCGCAGCCTAAGCTCGTGACCGGTCTAGAATCGTCCAATTTCAATATGTTTAGAGAGAAAGAGAATCTGTTTGTGTTTAAGGGTAGAAAGAATCACGAGCGCGAAGAAAGTGATGATAAAGAAGAAGAAGAAGCTAGGAGAAGTAACAAGCAATCGGCCATTAGTGTTGTTGACGAAGATGAACTATCAGAGATGTTTGATAAAGTTTTGCTTAGTATGGAGCATTTTCCACTTTGCAATGAAAATGATAGCGTACAGAATGGACAAGTGAAAACGGAGCAGTCACCTCCATCGAATGGAGGTAAGGCTCGAACTAAGAAACAAAGCAAGAAGAATGAGACCATAGATTTGAGGAATCTTCTGCTTCTGTGCTCACAATCTGTGTATGCCAATGACAACAGAAATGCTAATGAACTTCTGAAGCAGATTAGGCAACATTCTTCACCCTCTGGAGATGCACCACAGAGGCTGGCTCACTACTTTGCCAATGGCCTTGAGGCACGCCTTCTTGGTAATGGTACTAGCGCAGAAACATTCTTTTTCTCGGCGAGCTCCAAGAGTATTAGCACTTCTGAGTATTTGAAAGCATATCAAGTTCATCTATCTACTAGCCCGTTCAAAAAGTTTGCATACTTCTTTGCAATTAAAGCGATTACCGAAGCTGCTGCAAATGCTGAAACACTTCATATAATTGATTTTGGTATCCTTTATGGTTTTCAGTGGCCAATACTTATCAAGTTTTTATCAGATACAAAAGGTGGACCTCCAAAACTGAAGATCACCGGGATAGAGTTCCCTTTACCCGGCTTTCGTCCAATGGAAAGAATCGAGGAAACCGGTCGTCGTCTTGCAAACTATTGCAAGCGTTTCAATGTTCCCTTTGAGTTTAACGCCATAGCATCGCGGAATTGGGAAACGATTCGAGTTGAAGATCTTAAAATCAAGAGCAATGAGGTAGTTGTTGTGAACTCTTTGATGAGGTTTAAGAATTTACTGGACGAGACTATCGAAGCAAACAGTCCTAGAGATGCGGTTCTTCATTTGATCAGGAAGATAAATCCGGTTATTTTTGCTCAGTCCATTGTTAATGGATCATACAATTCGCCTTTCTTTGCTACGCGTTTTAGGGAAGCACTGTTTCATTTTTCTGCTATCTACGACAATTACGATACTGTAATACCGCGGGAAAACAAATACAGGATGATGATGGAGAAGGAAAGTGTGGGAAGGGAGGTTATGAATGTTGTAGCATGTGAAGGTTTAGAGAGAGTTGAGAGGCCTGAGACATACAAACAATGGCAGGCCAGGAATACAAGGGCTGGTTTCAAGCAGCTTCCATTGGATCCAAAATTAATGGACAAATTTAGGACTAAGTTGAGGAAATGGTATCATAAAGATTTTGTTTTTGATGAAGACAACAACTGGATGCTTCAAGGTTGGAAAGGTCGCATTTTGTATGCTTCAACTTGTTGGGTGCCTGCATAA 2247 0.405 MDPNFPEASNFIKGYYHFDEEGNIVVSESDPIQYDNFLDADPNQYDGFLDAGSNQYDGFLDADPLDFSVNTVPMQGSSSASVTDPSLEDTDFSDTIKFISQILMEEDVDRRPFYDPVLQITEKSFNDALLHENKPLSPNQHPLDIHSSDGSTSTGTGTSTSTSNSNSNSSIDEFRESKPLSPETPVSDLSNNVFQFSSPAISHSLSRPNTTSVSNGLRDLDSSITNMLAQNIFSDADSVSLFRKGLEEANKFLPPQPKLVTGLESSNFNMFREKENLFVFKGRKNHEREESDDKEEEEARRSNKQSAISVVDEDELSEMFDKVLLSMEHFPLCNENDSVQNGQVKTEQSPPSNGGKARTKKQSKKNETIDLRNLLLLCSQSVYANDNRNANELLKQIRQHSSPSGDAPQRLAHYFANGLEARLLGNGTSAETFFFSASSKSISTSEYLKAYQVHLSTSPFKKFAYFFAIKAITEAAANAETLHIIDFGILYGFQWPILIKFLSDTKGGPPKLKITGIEFPLPGFRPMERIEETGRRLANYCKRFNVPFEFNAIASRNWETIRVEDLKIKSNEVVVVNSLMRFKNLLDETIEANSPRDAVLHLIRKINPVIFAQSIVNGSYNSPFFATRFREALFHFSAIYDNYDTVIPRENKYRMMMEKESVGREVMNVVACEGLERVERPETYKQWQARNTRAGFKQLPLDPKLMDKFRTKLRKWYHKDFVFDEDNNWMLQGWKGRILYASTCWVPA 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi313g00018 748 MobiDBLite consensus disorder prediction 282 303 - -
Vivi313g00018 748 MobiDBLite consensus disorder prediction 140 175 - -
Vivi313g00018 748 ProSiteProfiles GRAS family profile. 362 746 IPR005202 -
Vivi313g00018 748 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 305 741 IPR005202 -
Vivi313g00018 748 MobiDBLite consensus disorder prediction 336 365 - -
Vivi313g00018 748 Pfam GRAS domain family 371 745 IPR005202 -
Vivi313g00018 748 MobiDBLite consensus disorder prediction 132 187 - -
Vivi313g00018 748 MobiDBLite consensus disorder prediction 282 310 - -
Vivi313g00018 748 MobiDBLite consensus disorder prediction 336 357 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi313g00018 95 748 GRAS Transcription Factor Family AT1G07530 49.858 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi313g00018 GRAS 1.1e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi313g00018 - - lja:Lj0g3v0300259.1 871.692