Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi313g00017 ATGGCTTCCATGACAGATCCTTCCTTTGAAGACACTGATTTTTCAGAAACCATCAACTTCATAAACCAAATCCTAATGGAAGAAAACTTTGATCACACACCATTTCACGACTCACTAACCTTACAAATCACACAAAAATCCTTCTCCGATGCTCTCTTACACCCCTTAGATATGCATAATCCTAATGGAAGAACCACCACCTGTAGTAACAGCAATAGCAATAGCAGCATCGATAATTCTTGTGAATTGAAACCCCTTTCCCCTCATACTCATGTTTCTGATCAGCATAATCATCCTTCTATTTCTCACAATTTGGATTCTTCAATTACCAATATGTTGGCCCAAAACATATTCAGTAATGCAGATTCTGTTTCCCTATTCAACAAAGGTTTTGAAGAAGCCAACAAGTTTCTTCCTCCTCAGCCTCAACTCTCCACCGGTCTAGATTCATCTAATTTCAATATGATCAGAGAGATTGCGTTGAAGGGTAGAAAGAATCACGACCGCGAAGAAGAACAAGAAGGGAGGAGAAGTAACAAGCAGACAGCTATTAGTGTTGTTGATGAAGATGAACTATCAGAAATGTTTGATAAAGTCTTGCTTAATGTCGAAAATGATTGCTTGCAGAATGAGCAACCATATTCAGCTAATGGAGTAAAGGTTGATTTAAGGAATCTTCTGCTTATGTGTTCACAAGCTATGTATGATAATGACAATAGAAATGCTATTGGATTTCTGAAGCAGATTAGGCAACATTCTTCGCCTTTTGGAGATGCATCGCAAAGGGTGGCACATTACTTCGCCAATGGCCTTGAGGCACGTCTAGTAGGCGATGGAGCCGGTGCACAAACATTCTATTCCTCGCCGAGCACCAAGAGGATCACTGCTTCTGAGTTTTTGAAAGCATACCAAGTTCATTTTACTAGCCCGCCTTTCAAAAAATTTGCATTTTTATTTGCAAATGAAATGATTATGAAAGTTGCTGCAAAGGCTGAAACCCTTCATATTATTGATTTTGGAATCCTTTATGGTTTTCAATGGCCAATTCTTATTAAGTTTTTATCAGATAGAGAAGGTGGGCCTCCAAAGCTGAGGATCACAGGGATAGAGTTTCCTCTACCCGGCTTTCGCCCGACAGAAAGAATTGAGGAGACCGGTCATCGTCTTGCCAACTATTGCAAACGCTTCAATGTTCCGTTCGAGTACAATGCCATAGCGTCACGGAGCTGGGAAACAATCCGAGTTGAAGATCTTAAAATCAAAAGCAACGAGCTAATCGCAGTGAACTGTTCGATGAGGTTTAAAAATTTATTAGATGAGAGTATTGATGCCAACAGTCCTAGAAATACGGTTCTGAACTTGATCAGGAAGATAAATCCGAATATTTTTACTCTGTCCATCGTTAATGGATCGTATAATTCTCCGTTCTTCGCTACGCGGTTTAGGGAGGCATTGTTTCATTTTTCTGCTTTTTATGATTCGATTGACACTGTCATACCAAGGGAAAATGAATGGAGGATGATGCTTGAGAGGGAAATCATGGGTAGAGAAGTTATGAATGTTGTAGCATGTGAAGGTTTAGAAAGAGTTGAGAGGCCTGAGGCATACAAACAATGGCAGGTTAGGACTACAAAGGCAGGTTTCAAGCAGCTTCCATTGGATGCAGAATTAATGGACAAATTTAAGAGTAAGTTGAGGAAATGGTACCATAAAGATTTTGAATTTGAAGAAGACAACAAATGGATGCTTCAAGGTTGGAAAGGTCGCATTTTATATGCTTCAACTTGTTTGGTTCCTGCATAA 1803 0.3966 MASMTDPSFEDTDFSETINFINQILMEENFDHTPFHDSLTLQITQKSFSDALLHPLDMHNPNGRTTTCSNSNSNSSIDNSCELKPLSPHTHVSDQHNHPSISHNLDSSITNMLAQNIFSNADSVSLFNKGFEEANKFLPPQPQLSTGLDSSNFNMIREIALKGRKNHDREEEQEGRRSNKQTAISVVDEDELSEMFDKVLLNVENDCLQNEQPYSANGVKVDLRNLLLMCSQAMYDNDNRNAIGFLKQIRQHSSPFGDASQRVAHYFANGLEARLVGDGAGAQTFYSSPSTKRITASEFLKAYQVHFTSPPFKKFAFLFANEMIMKVAAKAETLHIIDFGILYGFQWPILIKFLSDREGGPPKLRITGIEFPLPGFRPTERIEETGHRLANYCKRFNVPFEYNAIASRSWETIRVEDLKIKSNELIAVNCSMRFKNLLDESIDANSPRNTVLNLIRKINPNIFTLSIVNGSYNSPFFATRFREALFHFSAFYDSIDTVIPRENEWRMMLEREIMGREVMNVVACEGLERVERPEAYKQWQVRTTKAGFKQLPLDAELMDKFKSKLRKWYHKDFEFEEDNKWMLQGWKGRILYASTCLVPA 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi313g00017 600 MobiDBLite consensus disorder prediction 162 182 - -
Vivi313g00017 600 Pfam GRAS domain family 223 595 IPR005202 -
Vivi313g00017 600 ProSiteProfiles GRAS family profile. 214 598 IPR005202 -
Vivi313g00017 600 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 158 592 IPR005202 -
Vivi313g00017 600 MobiDBLite consensus disorder prediction 162 178 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi313g00017 11 599 GRAS Transcription Factor Family AT2G29060 47.368 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi313g00017 GRAS 9.5e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi313g00017 - - tpra:123918580 922.924