Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi313g00016 ATGTTTTCTGCTGATACCCTTGTTGAGAATTTTCCTGGTTCTGTTAATCAGTGCATGTTCGGAAATATTCCTGTGTCTGTTTTTTCAAACCAGAATCCAGAAAACGGTTTCAACTTTCAAGATTCTGTTTCAGTTTCTAGTGATTCTGTTCCTTCTTCTGTTATAACTTCAAATGGTGAATCTTCTGAGAGTACTAAGTATTCAAATCCAATTCTTAGATACATAAGTGATATACTCATGGATGAAGAAGATGATTTGGAGAAGAAACCATGTATGTTGCAGGATTGTTTGAAACTCCAAGCTGCTGAAAAATCGTTTTATGATGTTTTAGGTGATAATTTGGGTGCAGGAAATGGAAATGGAACTAGTACTAGTTCTGAGAGCTATAGTAATGGCAGTTACACCACTGATAATTCTGTAGTTGATTGTGATTCACCAGAAAATAATGCATATGAGGTGTTTGATAAAATACCTCATGATCCGTTTAGAGAGGTAGAAGCTGTTTTCAGTTTTCCAAATGCTGCTTGGAAGACGAATGAAGAGGGTAATAATAATAATAATAATATGGTTTTGGGTTCTAGAGGGTCAAGGGAAAAGAGAAGCCATTTGATGAATGATGTTGGTATCTTAGATGGAGAAGATCTGAGAAGTAACAAGGTTTCAGCTGTTTATTATGATGATTCAGACCTATCAGAGATGTTTGATGAGGTACTTCTTTGTAATGATGGTAAAAGTCCATCCATTTTTTGTGCTAATCCTGAACAATCACATTCACATGGATCTAATAGAAAAACATCTCGTTCCAAGAAAGGTTCAAACAAGGGTAAAAATCTGAGTACTACGGTGGATTTATGGACTTTGTTAACTCAATGTGCACAAGCTGTTGGTAGCTATGATCAAAGGAATGCTAATGACATACTCAAGCAGATTAGGCAGAACTCTTCACCTCGTGGTGATGGACTTCAGCGTTTAGCTCATTACTTTGCTGATGGACTTGAGGCGCGGTTATCTGCTGGTACGCCAATGTATAAACGCCTTGACTCGGCGTCTTCTGCAGATATGTTAAGAGCTTATAAAGTTTACATCACAGCATCTCCATTTCAAAGGATGTCGAATTTCTTGGCCAACAGAACTATTCTGGGTCTGGCAGAAAACAAAAGCAGCATCCACATTATTGACTTTGGGATTTTCTATGGCTTTCAGTGGCCTTGTCTCATTCAGCGTCTTTCGGAAAGAGTCGGTGGGCCTCCAAAGCTTCGTATTACTGGAATTGATCTTCCTCAGCCAGGATTTAGGCCTGCAGAGAGGGTTGAGGAGACGGGTCGGCGACTTGAGAAGTACTGCAAGAGGTTCAAAGTTCCATTCGAGTACAACTGCCTTGCACAGAAATGGGACACTGTAAGACTTGAAGATCTCAAGATTGATAGAGAAGAAATAACAGTGGTTAACTGTTTATACAGAATGAAGAACCTCTCTGATGAAACGGTGACTGCAAATTGTCCGAGAGATGCTGTGTTGAGGTTGATCAGGAGGATTAATCCAAGCATCTTCATACATGGTGTAGTGAATGGAACTTATAACGCACCATTTTTTCTGACTAGGTTCAGGGAAGCAATGTTTCATTTCTCATCATTGTTTGATATGCTTGAAGCTACTGTGCCGCGGGAAGATCCATATAGGTTGATGTTCGAGAAAGGGTTATATGGAAGGGATGCAGTAAATGTGATAGCTTGTGAGGGAGCAGAGAGGGTTGAAAGGCCAGAGACTTACAAGAATTGGCAGGTTAGGAATAAGAGAGCAAGGTTCAAGCAACTTCCATTGGCTCCTAAACTGGTAGACAGAGTGAAAGAAATGGTGAAGAAGGAATATCCAAAAGATTTTGTAGTTGATGAGGATGGGAAGTGGGTTCTGCAGGGTTGGAAAGGACGTATTCTGCAAGCTGTTTCTTGTTGGGTTCCTGCTTAA 1965 0.4 MFSADTLVENFPGSVNQCMFGNIPVSVFSNQNPENGFNFQDSVSVSSDSVPSSVITSNGESSESTKYSNPILRYISDILMDEEDDLEKKPCMLQDCLKLQAAEKSFYDVLGDNLGAGNGNGTSTSSESYSNGSYTTDNSVVDCDSPENNAYEVFDKIPHDPFREVEAVFSFPNAAWKTNEEGNNNNNNMVLGSRGSREKRSHLMNDVGILDGEDLRSNKVSAVYYDDSDLSEMFDEVLLCNDGKSPSIFCANPEQSHSHGSNRKTSRSKKGSNKGKNLSTTVDLWTLLTQCAQAVGSYDQRNANDILKQIRQNSSPRGDGLQRLAHYFADGLEARLSAGTPMYKRLDSASSADMLRAYKVYITASPFQRMSNFLANRTILGLAENKSSIHIIDFGIFYGFQWPCLIQRLSERVGGPPKLRITGIDLPQPGFRPAERVEETGRRLEKYCKRFKVPFEYNCLAQKWDTVRLEDLKIDREEITVVNCLYRMKNLSDETVTANCPRDAVLRLIRRINPSIFIHGVVNGTYNAPFFLTRFREAMFHFSSLFDMLEATVPREDPYRLMFEKGLYGRDAVNVIACEGAERVERPETYKNWQVRNKRARFKQLPLAPKLVDRVKEMVKKEYPKDFVVDEDGKWVLQGWKGRILQAVSCWVPA 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi313g00016 654 Pfam GRAS domain family 286 651 IPR005202 -
Vivi313g00016 654 ProSiteProfiles GRAS family profile. 275 652 IPR005202 -
Vivi313g00016 654 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 237 645 IPR005202 -
Vivi313g00016 654 MobiDBLite consensus disorder prediction 43 65 - -
Vivi313g00016 654 MobiDBLite consensus disorder prediction 250 277 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi313g00016 11 653 GRAS Transcription Factor Family AT2G29060 43.304 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi313g00016 GRAS 2e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi313g00016 - - lja:Lj3g3v3213190.1 901.738