Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi311g00023 ATGAGAGAAATGCAGAGTGAGGTAAAATGGGAGAAGAAGGAAGAGGAGGAAGAAAAAGAAGAAGCAGAAGCTCAAGTTGAAATATGGAAATACATATTTGGTTTTGTAGAACTATCTGTGGTCAAATGTGCAATTCAACTTGGCATAGCTGAAGCCATTGAAAACCACAAAAAACCCATGTCACTATTAGAGTTATCATCAACTCTAAAATGCGACCCTTCATATCTTAACCGCATCATGAGATTCCTAGTACATAGGAAAATATTCAAAACCATATCTACCAACCATGACAACTATCCCAGTTATGTTCAAACACCACTTTCTCGCCGTTTGATTCGTAACGGCGAACATAGCATGACTGCTCTTCTTTTATTAGAGAGCAGTCCTGTAATGGTAGCACCTTGGCTAAGTCTAAGTGACCGTGTTTTGGTAAATGGAAATCCATCTTTTAAGAAGGCTCATGGTGAAGATCTTTGGAGCTATGCTGCTTCAAATATTGATCATAGTAATCTTCTTAATGATGCTATGGCTTGTGATGCTAAAGTTGTCGTGCCTGCTATTGTTGAAGGTTGCAGTGAGTTGTTTGATGGTGTTGGATCATTAGTAGATGTTGGTGGTGGGAATGGTACCACCTTGAGCATCCTTGTTAAGGCTTTTCCTTGGATTCAAGGTATCAACTTTGACCTTCCTCATGTCATTGATGTGGCTCCAAAGTTTGATGGGGTAGAACATGTGGCAGGTGACATGTTTACAAGTGTTCCCAAAGCTGATGTTGTATTTTTTAAGTGGGTTTTGCATGATTGGGGGGATGAAGAATGCATCAAAATCTTAAAGAATTGTAGGGAAGCTATACCAAAAGAAAACGGAAAAGTGATTATTGTGGAAGCAGTTATAGAAGAAGGAGGAGGAGGAGGAAAACACAACAAGTATGAAGACGTAGGGTTAATGTTAGACATGGTGATGATGGCACACACAAGCATTGGCAAAGAAAGAACACTGAAAGAATGGGAGCATGTGATTAAAATGGCTGGATTCAACAGATTCACTGTGAAATCTATCAATGCCGCACAGTCTGTAATTGTCGCCTCGTGCTAA 1095 0.3982 MREMQSEVKWEKKEEEEEKEEAEAQVEIWKYIFGFVELSVVKCAIQLGIAEAIENHKKPMSLLELSSTLKCDPSYLNRIMRFLVHRKIFKTISTNHDNYPSYVQTPLSRRLIRNGEHSMTALLLLESSPVMVAPWLSLSDRVLVNGNPSFKKAHGEDLWSYAASNIDHSNLLNDAMACDAKVVVPAIVEGCSELFDGVGSLVDVGGGNGTTLSILVKAFPWIQGINFDLPHVIDVAPKFDGVEHVAGDMFTSVPKADVVFFKWVLHDWGDEECIKILKNCREAIPKENGKVIIVEAVIEEGGGGGKHNKYEDVGLMLDMVMMAHTSIGKERTLKEWEHVIKMAGFNRFTVKSINAAQSVIVASC 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi311g00023 364 PIRSF O-mtase 4 364 IPR016461 GO:0008168
Vivi311g00023 364 Coils Coil 1 32 - -
Vivi311g00023 364 CDD AdoMet_MTases 201 294 - -
Vivi311g00023 364 PANTHER O-METHYLTRANSFERASE 38 345 IPR016461 GO:0008168
Vivi311g00023 364 FunFam O-methyltransferase family protein 11 111 - -
Vivi311g00023 364 Pfam Dimerisation domain 40 84 IPR012967 GO:0046983
Vivi311g00023 364 Pfam O-methyltransferase domain 135 346 IPR001077 GO:0008171
Vivi311g00023 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 361 IPR029063 -
Vivi311g00023 364 SUPERFAMILY "Winged helix" DNA-binding domain 18 115 IPR036390 -
Vivi311g00023 364 Gene3D - 10 111 IPR036388 -
Vivi311g00023 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 364 IPR016461 GO:0008168
Vivi311g00023 364 Gene3D Vaccinia Virus protein VP39 113 362 IPR029063 -
Vivi311g00023 364 FunFam O-methyltransferase family protein 113 363 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi311g00023 41 350 Monolignol Biosynthesis Gene Families AT5G54160 38.245 1.02e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi311g00023 K22588 - gmx:100782951 454.907