LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi311g00022	ATGGGAGAAATACAAAGTGAGGTAACATGGGAGAAGAAGGAGGAGGAAGAAGAAGCAGAAGCTCAAGTTGAAATATGGAAATACATATTTGGTTTTGTAGAACTATCTGTGGTGAAATGTGCAATTCAACTTGGCATAGCTGAAGCAATTGAAAACCACAAAAAACCCATGTCACTATTAGAGTTATCATCATCACTAAAATGTGACCCTTCGTATCTTAACCGCATCATGAGATTCCTAGTACATAGGAAAATATTCAAAACCATATCTACCAACCATGACAACTATCCTAGCTATGTTCAAACACCACTTTCTCGCCGTTTGATTCGTAACGGCGAGAAAAGCATGACTGCTTTTCTTTTGCTGGAAAGCAGTCCTGTTATGGTAGCTCCTTGGCTTAGTCTAAGTGACCGTATTTTAGAAAACGGAAACCCTTCTTTCAAGAAGGTTCACGGTGAAGATGTTTGGCGCTATGCTGCTTCAAATCTTGATCATAGTAATCTTATCAACGATGCTATGGCTTGTGATGCTAAAGTTGCTGTGCCTGCTATTGTTGAAGGTTGCAGTGAGTTGTTTGATGGTGTTGGATCATTAGTAGATGTTGGTGGTGGGAATGGTACCACCTTGAGCATCCTTGTTAAGGATTTTCCTTGGATTCGAGGTATCAACTTTGATCTTCCTCATGTCATTGATGTGGCTCCAAAGTTTGATGGTGTAGAACATGTGGCAGGTGACATGTTTACAAGTGTGCCCAAAGCTGATGCTGTATTTTTTAAGTGGGTTTTGCATGATTGGGGAGATGAAGAGTGCATCAAAATCTTAAAGAATTGTAGGGAAGCTATACCAAAAGAAAATGGAAAAGTGATTATTATGGAAGCAGTTATTGAAGAAGAAGGAGGAGGAGGAGGAAAACACAACAAGTATGAAGACGTAGGGTTAATGTTAGACATGGTAATGATGGCACATACAAACATTGGCAAAGAAAGAACACTAAAAGAATGGGAGCATGTGATCAGAATGGCTGGATTCAGTACAATCACTGTGAAATCTATCAATGCCGCACAGTCTGTAATTGTCGCCTCGTGCTAA	1089	0.3994	MGEIQSEVTWEKKEEEEEAEAQVEIWKYIFGFVELSVVKCAIQLGIAEAIENHKKPMSLLELSSSLKCDPSYLNRIMRFLVHRKIFKTISTNHDNYPSYVQTPLSRRLIRNGEKSMTAFLLLESSPVMVAPWLSLSDRILENGNPSFKKVHGEDVWRYAASNLDHSNLINDAMACDAKVAVPAIVEGCSELFDGVGSLVDVGGGNGTTLSILVKDFPWIRGINFDLPHVIDVAPKFDGVEHVAGDMFTSVPKADAVFFKWVLHDWGDEECIKILKNCREAIPKENGKVIIMEAVIEEEGGGGGKHNKYEDVGLMLDMVMMAHTNIGKERTLKEWEHVIRMAGFSTITVKSINAAQSVIVASC	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi311g00022	362	FunFam	O-methyltransferase family protein	9	108	-	-
	Vivi311g00022	362	Pfam	O-methyltransferase domain	132	344	IPR001077	GO:0008171
	Vivi311g00022	362	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	113	359	IPR029063	-
	Vivi311g00022	362	Pfam	Dimerisation domain	37	81	IPR012967	GO:0046983
	Vivi311g00022	362	FunFam	O-methyltransferase family protein	110	361	-	-
	Vivi311g00022	362	Gene3D	-	7	108	IPR036388	-
	Vivi311g00022	362	SUPERFAMILY	"Winged helix" DNA-binding domain	15	112	IPR036390	-
	Vivi311g00022	362	PANTHER	O-METHYLTRANSFERASE	35	343	IPR016461	GO:0008168
	Vivi311g00022	362	PIRSF	O-mtase	3	362	IPR016461	GO:0008168
	Vivi311g00022	362	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	26	362	IPR016461	GO:0008168
	Vivi311g00022	362	CDD	AdoMet_MTases	198	291	-	-
	Vivi311g00022	362	Gene3D	Vaccinia Virus protein VP39	109	360	IPR029063	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi311g00022	38	348	Monolignol Biosynthesis Gene Families	AT5G54160	38.125	2.61e-66	212

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi311g00022	K22588		-	gmx:100782951	466.463