Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi311g00005 ATGAGCATAAATTCAAATGACACAGTGTTCAACAGAATCACAAGATTGAATGAAACAGGTTACGAAGTTTGTTATGATGCTCCACCCCATACTGTTTCAGATGGTTTATGGGGTGGAAAAGAAAATGGAAGAACTCCACTCAAATCTTTTGTTCCCTTGTTTGAATTACAAGTGCTTGTCATTTTCGCCCTCACCGAAATCACCACTTTGGTTCTCAAACCTCTGAGACTCCCTCCATTCATCTTACAAATGATTGCTGGTTTGATTATAGCCATTTTGTTTGAGGTGAAAGAACTGGAGAAATACATGACAGCGGTGTTTCCTTATGGAACTCATGACATAATTTCGGCGATTTCATCATTTGGTTTTGTGTTATTCATTTTCATAAACGGTGTACAAATGGATTTCAGCATGATAACGAGGACGGGAAACAAGGCATGGACAGTTTCGATTATTGGTTTGGTGGTACCATTATTTGTTGGCATTACACCATTACTAGTGTACCCTGAAAAAATAATAGCCATTGAGGTAAAAAACGGAAATGGAATTTATGTTGCATTGGTTTCTCATGCTATAAGTTCATTTGCGGTGATTGCTTCGCTTTTGAGTGAACTGCAAATCCAAAACTCCGAGCTTGGTAGATTGTCTTTGTCCTCGGCTTTAGTTAGTGACATATTGAGCACGGTTGTTACAACCAATATTATCGCGGTTAGGACTAATCCTAGTCTGAAAGTGGTTTCGAGAAACTTGATCTCGCTCTTTATACTTGCAGTATTCGTTCCATTAATATGCAGACCGATTATGTTTTGGATCATTAAACATACACCAGAAGGACGAAATGTCAAAGACGGTTACATTTATGTGATTATTGCATTGGTTTTTGCTTTAGGTGTTGTATCAGTTAAGATAGATCAAGAATTTGTCTTAGGAGTTTTCATTTTGGGACTTTCCGTTCCCGAAGGACCTCCTTTAGGATCTGCATTGGTTAAGAAGCTTCAGTTCTTTGGACCGACGCTTCTTTTGCCTATATTTGTGACTACTTCTGTGTTGAAAGCAGATTTTTCAATCGATTTTTCATCGTTCGTTATGGTGTCTACCGGTATGGTGATTCTTTTGACTCATGTGGTTAAAATAGCAGCATGCTTTATAACTGCCCTCTGCTGCAAGATGCCTGTCAATGATGCTTTGTGCCTTTCCCTCATTTTGAACACCAAAGGTGTAATCGAAATCGGCGCCTACCATGCCTTATTCGACAATAATGTTATCGACGGGAAAACATATGGAGTTATGATGTTAAGTGTAATGATCATAGGAACCATTGTGCATTGGTCAGTGAAGTTTTTATATGATCCATCAAGGAAATACGCAGGGTACCAAAAACGGAACATCGTTGGTTTAAAGCGAAACTCGGACCTGAGAATACTATTAACAGTTCAAAAACATAATCATATTTCAGGAGCAACAGATTTCTTAGACATATGTTGTCCAACAAATGAGAATCCACTCACAGTTGATGTGATTCATGTGATTGAGCTAGTTGGAAGAGCCTTACCTGTTTTCATTCCTCATTGCCTTCAAAGACAACTATCAAGATCCGCTTCGCATAAATCATATTCCGACGATGTCATTCTTGCTTTCGATATCTACGAGCACGAAAATCAAAATGCATTATCAATAAACACTTACACAGCAATCTCTCCAGCAAATCTCATGTATGAAGATGTTTGTAACCTCGCATTGGACAAAGTTGCATCCATCATAATTCTTCCTTTTCATATAAGATGGTCTAGCGACGGCGTTGTTGAATCCGACGACAAGAAAATACTCCGAGCGTTGAATCAAAAAGTCCTCGAAATAGCCCCATGTTCGGTCGGAATCCTGGTAACTCGCGCTAATTCGATACCGAAGACAACATCATCAAACTCAGTAGCATTGGAATATTCCATTACTCGATTAGCCATCATTTATATAGGGGGATCGGACGACGATGAAGAAATTTTATGCTTAGCGAAACGAGCGATGAATAGTCCGAGGATCAAACTAGTTGTTTACCATCTTGTTGCTAAAGACTGCATAGCAGAATTGGAGGACTTAATGGTAACTGGTGAAGAAATGTTGCAAGAGCTGAAACATTCAGAAAATGTGAAGTATCAAGAGATTTTCACAAAGGATGGATCACAAACAGCTGGTTTCTTACGCGACATAGTTACCGAACACGACTTTTTTATAGTCGGGAGAAGACACGGAAGTATGTCGCCTCAAACAGATGGATTATCAGAATGGAGTGAGTTTCCAGAACTTGGTGCTATTGGAGATTTTCTATCATCGCCTGATCTTAATAGTTGGGCTTCTGTTTTGGTTGTGCAGCAACAACTTTCGTGCAAGAATGAACTCAAAGGTTGGGTTTTGTAG 2412 0.3922 MSINSNDTVFNRITRLNETGYEVCYDAPPHTVSDGLWGGKENGRTPLKSFVPLFELQVLVIFALTEITTLVLKPLRLPPFILQMIAGLIIAILFEVKELEKYMTAVFPYGTHDIISAISSFGFVLFIFINGVQMDFSMITRTGNKAWTVSIIGLVVPLFVGITPLLVYPEKIIAIEVKNGNGIYVALVSHAISSFAVIASLLSELQIQNSELGRLSLSSALVSDILSTVVTTNIIAVRTNPSLKVVSRNLISLFILAVFVPLICRPIMFWIIKHTPEGRNVKDGYIYVIIALVFALGVVSVKIDQEFVLGVFILGLSVPEGPPLGSALVKKLQFFGPTLLLPIFVTTSVLKADFSIDFSSFVMVSTGMVILLTHVVKIAACFITALCCKMPVNDALCLSLILNTKGVIEIGAYHALFDNNVIDGKTYGVMMLSVMIIGTIVHWSVKFLYDPSRKYAGYQKRNIVGLKRNSDLRILLTVQKHNHISGATDFLDICCPTNENPLTVDVIHVIELVGRALPVFIPHCLQRQLSRSASHKSYSDDVILAFDIYEHENQNALSINTYTAISPANLMYEDVCNLALDKVASIIILPFHIRWSSDGVVESDDKKILRALNQKVLEIAPCSVGILVTRANSIPKTTSSNSVALEYSITRLAIIYIGGSDDDEEILCLAKRAMNSPRIKLVVYHLVAKDCIAELEDLMVTGEEMLQELKHSENVKYQEIFTKDGSQTAGFLRDIVTEHDFFIVGRRHGSMSPQTDGLSEWSEFPELGAIGDFLSSPDLNSWASVLVVQQQLSCKNELKGWVL 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi311g00005 803 PANTHER CATION/H + ANTIPORTER 31 791 - -
Vivi311g00005 803 Coils Coil 692 712 - -
Vivi311g00005 803 Gene3D - 54 456 IPR038770 -
Vivi311g00005 803 Pfam Sodium/hydrogen exchanger family 59 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi311g00005 11 791 Antiporter Super Family AT5G22900 34.620 4.54e-146 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi311g00005 K26731 - mtr:11420455 1070.84