Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi308g00004 ATGAGTGAAGCTTGGAGATTCACAACGTTCTTCTGCATGGTGTTAATAATTGGTGTGGTAGTGTCTATCCCTTTGACTCTGAACAGCCAAGGGTTGGAACTTCAAAAGATGAAGGAATTCTTGAAATGGAATGGTGAAGAAAGAGCCATGGATCCATGCTTGGACATTGGCCAACAAAGGAATATACATACTCCACTCAGTAGGAAACTTACACAAACATCAAATTCTGCTAACTCACACAAAACCAATATTGATGATCATAAAAACACTCTTTCACCATCATCTTCACCTTCATCACCACCACTTTCTACACCTATTTCACCTTCATCTTCACTACTTTCCATATCAGAAACTCCCTCAATTTCACCATCACCAGAACTTTCACCTTCACCTGAGGCAGCACCAACAACTTCCTACTTACCATTTATATCATCAAATCCACCTATAGTTATGTCCACACCACAACTTTCTAATTGGATTTCAGCACCTTCTCCTTCTTCATCTTCAAACCAAAGGAATTCAAGAAGTTCAAACCGAAAGCAACATTCTGTTGTTATATGGTCAACAGTTGGAGGGTTTTCCTTCCTTGTTTTGGTTTCATGCACTGTTTTCATTTGCTTCAGAAGTAGTAAGGTTGTAACTGTCAAACCTTGGACCACAGGGTTGAGTGGCCAGCTTCGAAAAGCGTTCATAACAGGTATTCCGAGTCTCAAACGAGCCGAACTCGTTGTAGCTTGTGAAGATTTCAGCAACATTATCGGTTCACTGAAAGATGAGACTATCTATAAGGGAACTCTTTCAAGTGGAGTTGAGATAGCTGTAGTATCTTCTGCAGTAGCTTCTTCTAAAGAATGGTCAAAAATTTTGCAAGCCCAGTTCAGAAACAAGATTGAGACGTTGTCGAGAGTGAACCACAAGAATTTTGTGAATCTTATTGGTTATTGTGAAGAGAATAAACCATTCACAAGGATGATGGTTTTTGAGTATGCTCCGAACGGAACATTGTTTGAGCATCTACATATTAGAGAAGCGGAACAGCTCGACTGGAGAATGAGAATGAGGATAGCTATGGGAATATCTTACTGTCTAGACCACATACATCAACTCACACCACCAATTGCGCACAAAACCTTGTTATCTTCCTCTATATATCTAACAGAAGATTACGCTGCTAAAATATCAGACCTTAGTTTCTGCACCGCCGAGGTTGATACAAAGAAGAGTTCAGAAAAAACATCGGAAGAAGAAATAAAAGACAATGTTTATAGTTTTGGCGTAGTATTGTTTGAACTAGTAACAGGAAAAATTCCATATGCGGGAGAAAACGGCTTTGCGACAGATTGGGCTGCTGAATATATAAGAGGACAACCTCTGAGAGAGTTGGTGGATACAAACTTGAAATCAGTGAAAGATGATGAAATTGAGAAATGGTCTGAAGTGATTCACAGTTGTGTAGATCCTGATCCGGAGAAAAGGCCATCGATGAAAGAGGTTACATCTAAGTTGAAGGAAATCACTTCTATGGAGCCTGACGGAGCAACACCAAAATCATCTCCTCTTTGGTGGGCCGAAATTGAAATCATGACCTCAGATTTATGTTGA 1602 0.3983 MSEAWRFTTFFCMVLIIGVVVSIPLTLNSQGLELQKMKEFLKWNGEERAMDPCLDIGQQRNIHTPLSRKLTQTSNSANSHKTNIDDHKNTLSPSSSPSSPPLSTPISPSSSLLSISETPSISPSPELSPSPEAAPTTSYLPFISSNPPIVMSTPQLSNWISAPSPSSSSNQRNSRSSNRKQHSVVIWSTVGGFSFLVLVSCTVFICFRSSKVVTVKPWTTGLSGQLRKAFITGIPSLKRAELVVACEDFSNIIGSLKDETIYKGTLSSGVEIAVVSSAVASSKEWSKILQAQFRNKIETLSRVNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWRMRMRIAMGISYCLDHIHQLTPPIAHKTLLSSSIYLTEDYAAKISDLSFCTAEVDTKKSSEKTSEEEIKDNVYSFGVVLFELVTGKIPYAGENGFATDWAAEYIRGQPLRELVDTNLKSVKDDEIEKWSEVIHSCVDPDPEKRPSMKEVTSKLKEITSMEPDGATPKSSPLWWAEIEIMTSDLC 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi308g00004 533 MobiDBLite consensus disorder prediction 65 80 - -
Vivi308g00004 533 FunFam Inactive receptor-like serine/threonine-protein kinase 221 329 - -
Vivi308g00004 533 Gene3D Transferase(Phosphotransferase) domain 1 330 516 - -
Vivi308g00004 533 MobiDBLite consensus disorder prediction 65 134 - -
Vivi308g00004 533 Pfam Protein tyrosine and serine/threonine kinase 253 502 IPR001245 GO:0004672|GO:0006468
Vivi308g00004 533 ProSiteProfiles Protein kinase domain profile. 247 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi308g00004 533 Gene3D Phosphorylase Kinase; domain 1 224 329 - -
Vivi308g00004 533 MobiDBLite consensus disorder prediction 105 123 - -
Vivi308g00004 533 SUPERFAMILY Protein kinase-like (PK-like) 233 502 IPR011009 -
Vivi308g00004 533 PANTHER PROTEIN MALE DISCOVERER 2 68 529 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi308g00004 229 509 Receptor kinase-like Gene Family AT1G67720 34.211 3.65e-36 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Vivi308g00004 PK_Tyr_Ser-Thr 9.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi308g00004 - - gmx:100814122 593.578