Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi307g00001 ATGGCTTCAGCATTGGAATGTTGGTCGAGACGCGGCAGCAACAACAACAACAACGACGAAGACATGGTAGAACAAGTCCTCATGGAAACCAACCCATCTTCACACTCACAACCCAACCACAAAGACTCTTCCGTTATCCATAAGAAGTTCAACAAACTCACTCGCAATGTTTCTGAAGCTATTGCTTCTCTCAAAAACACCCTCAATATTAACCTTAACCTTGATTCTTCCAAACCCGACAACAACAACAGTTCTCGTACTAGCAACAATCTCGTTTGGGGAACTGTTGTTCGAAACTTAACTCAGCTTTACCCTGGTAGCCAGCTTCCTGAGAAGCTCATGTCCAACATTCGTAAACACTACGATTCCTTGCCTCCTAGTTATTCTCAGGCGGGATTTGATGTTAAAGATGTGTTTCTTCACATCAAGTTAATTGAGCAAGCGTTGGAAGATTCACAGGCCGCGATTTTGATTGATGAGGAGTGTGATGATGAGATGCAGCTTCAGGGGTCTTTGTTCAAGTTGACATTTGCTTGCAACTCTCCGATTTCGTGGCCTGCAATGTCGAGTGCGTTGGATAGTTCCTCCATTTGCTGCAAGAAGATTCAGATCTTTGAGAAGAAAGGCCTCACTCTTGGAATTGTGCTTTTACTTGTTCTTTCTGGGGCTGGTCAAGATAACTTGGTGAGGACCCGGGTTGAAAGTGCTCTCAAGTTTGCCATGAAGAAGCCTAAAGGTAGTGTTGTGAAGCTTCCTTTTGGGCTTTGTGGATGTCAAGAGGAGAATTTCAAGGGGAGGGAGCTTGGAGAGATTGAAGAAGATTGTAGCGGTGTATACTGTGAAAATTCTAGTCAAAAGATTCAGCTTGAAATGCCCTTGCCTAATTCGTCGTTTCATGTATCAGTAGACGAGTGGCAGACTATTCAGACAGATGCAGATGAGATGCAAAAATGGTTGTTGAACTCGGATAGTCTAGAGTTTTTGGAACAGATTGGACAAAATTCGTATAAAGGTGCCTACATGGGGAAAAAGGTTGGCATTGAGAAGCTTAGAGGATGTGACAAAGGAAACTTGTACGAGTTTGCACTCAGGAAAGATCTGCTACAACTGATGACATGTGGACATAAAAACATTTTGCAGTTTTGCGGTGTTTGTGTAGATGACAATCACGGGTTATGTGTAGTGACAAAATTCATGGAAGGTGGATCTGTCCATGACTTAATTTCAAAGAACAAAAAGCTTCAGAACAAGGATATTGTAAGAATTGCAGTTGATGTGGCCGAGGGGATCAAGTTTATGAATGATCACGGTGCTGCATATAGAGACCTTAATACTCAGAGGATTCTGTTGGATAGACATGGGAGTGCTTGCTTGGGAGATTTGGGTATAGTCACTGCCTGCAAGAGCAACCAAGAGGCAATGGACTATGAAACCGATGGTTACCGATGGCTAGCTCCTGAGATAATCGCTGGCGACCCCGAGAGTGTGACCGAGACATGGATGAGTAATGTTTATAGTTTCGGGATGGTAATTTGGGAGATGGTAACCGGTGAAGCAGCCTATAATGCATATTCACCCGTACAAGCAGCAGTAGGCATTGCCGCCTGTGGCCTTAGACCTGAGATCCCAAAGGACTGTCCACAAACTCTAAAATCTCTAATGACAAAATGCTGGAACAATACCCCTTCAAAACGCCCCGAATTCTCCGAAATTTTAGCGATATTGCTGCGAGCGACCAAACAACAACAATAG 1752 0.4378 MASALECWSRRGSNNNNNDEDMVEQVLMETNPSSHSQPNHKDSSVIHKKFNKLTRNVSEAIASLKNTLNINLNLDSSKPDNNNSSRTSNNLVWGTVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPPSYSQAGFDVKDVFLHIKLIEQALEDSQAAILIDEECDDEMQLQGSLFKLTFACNSPISWPAMSSALDSSSICCKKIQIFEKKGLTLGIVLLLVLSGAGQDNLVRTRVESALKFAMKKPKGSVVKLPFGLCGCQEENFKGRELGEIEEDCSGVYCENSSQKIQLEMPLPNSSFHVSVDEWQTIQTDADEMQKWLLNSDSLEFLEQIGQNSYKGAYMGKKVGIEKLRGCDKGNLYEFALRKDLLQLMTCGHKNILQFCGVCVDDNHGLCVVTKFMEGGSVHDLISKNKKLQNKDIVRIAVDVAEGIKFMNDHGAAYRDLNTQRILLDRHGSACLGDLGIVTACKSNQEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYNAYSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNNTPSKRPEFSEILAILLRATKQQQ 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi307g00001 583 Gene3D Transferase(Phosphotransferase) domain 1 318 581 - -
Vivi307g00001 583 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 108 577 - -
Vivi307g00001 583 PRINTS Tyrosine kinase catalytic domain signature 502 524 IPR001245 GO:0004672|GO:0006468
Vivi307g00001 583 PRINTS Tyrosine kinase catalytic domain signature 546 568 IPR001245 GO:0004672|GO:0006468
Vivi307g00001 583 PRINTS Tyrosine kinase catalytic domain signature 432 450 IPR001245 GO:0004672|GO:0006468
Vivi307g00001 583 PRINTS Tyrosine kinase catalytic domain signature 396 409 IPR001245 GO:0004672|GO:0006468
Vivi307g00001 583 ProSiteProfiles Protein kinase domain profile. 325 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi307g00001 583 Pfam Protein tyrosine and serine/threonine kinase 363 574 IPR001245 GO:0004672|GO:0006468
Vivi307g00001 583 SUPERFAMILY Protein kinase-like (PK-like) 298 575 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi307g00001 308 581 MAP Kinase Kinase Kinase AT2G17700 34.155 5.58e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Vivi307g00001 PK_Tyr_Ser-Thr 4.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi307g00001 - - gmx:100819097 895.19