Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi305g00010 ATGAAAAATATGGATTTCTCATTCACACTATTTCTTCTAGTATTGATCTTTTCATTCCAATCTTCATCTTCTTCTTCATCATCCTTAAGAAAAGGTTCATCCCTCTCAGTTGAAAATCCAGAAGACAAAATCATCTCACCAAATGGCATGTTCACTGCTGGCTTTACTTCCATTGGTGAAAATGCATACTCCTTTGCCATATGGTTCACAGAACCAAATTCTCTCAAACTCAACAACACAATCATTTGGACGGCGAATCGCGACCAACCGGTTAACGGAAAAAGATCGAAACTCACCCTATTAAACACAGGAAACATTGTTCTTCTTGATGTTTCTCTAAACAATGTTTGGTCTTCAAACACTGCATCATTGAAACCATTAGAGTTGCATCTCAAAAACGATGGAAATCTTGTGTTGCGTGAGCTACAAGGAACCGAAATACTCTGGCAGAGTTTTGATTCTCCAACAGATACTCTCCTTCCTGGTCAACCTCTTACCAGATATACAAAGCTTGTCGCTGCAATAAGTGAGACTAATCATTCATCTGGCTTCTACATGTCGTTTTTCGACGATGAAAATATTTTCGGCCTTCATTACAACGGCCGCGATGTTTCTAGCTCGTATTGGCCAAGACCTTGGCTTCTGAGTTGGGATGTTGGCAGATCAAATTTCAACAGTAGCAGAACTGCAGTGTTGGACTCTCTTGGTAACTTCCATTCTTCTGATAATTTCACTTTTTCGACTTCTGATTATGGATCTGTGCTGCAAAGAATAATGAAACTTGATTCTGATGGTATGGTGAGAGTTTATAGCAGAAATAATGTGTCAAAGAATTGGTATGTTTCATGGCAAGCCTTTTCTGGTACTTGTTTGGTTCATGGAATTTGTGGAGCTAATAGTACATGTAGTTATAGTCCTGAGTTTGGAAGAAAGTGCTCATGTATTCCAGGGTATAAGATGAGGAATCATGATGATTGGTCTTTTGGTTGTGAACCTATGTTTGATTTTACTTGCAATAAAAGTGAGTCAACCTTTTTAGAGATGAAGAATGTTGAGTTTTATGGTTATGATTTTCATTATATTGAAATTTGTAACTATAGTACTTGTGAGGATTTATGCATACAAGATTGTAATTGTGTTGCATTTCAACATTCTTTTTGGGAGAAAAAGGGGTTTTATAGGTGTTTTACAAAAACACAATTGCAAAATGGAAGGTTTGTACCTTCCTTTGAAGGATCAACCTACTTGAGATTACCTAAAGGTAATAGCTTCTCTAAAGGAGAATCTTCGACTCCGAGTAATCATCTTTGTTTAGAAAAACTTCAAAGAGTTTATGTCAAAGAAAGCGAAAACCATTACGTAAAGTTTTTTCTCTGGTTCGTCACTGTGATCGGAGCTTTTGAAGCGGTCTGCATTTTTTCCGTTTGGTGTTCCCTATTCCGGTCGCGTCAAAAGACTAATGCAGACCAACATGGTTACCACCTTGCCGAAATAGGGTTCAGAAAATTCAGTTACTTGGAGCTCAAGAAAGCAACAAAAGGGTTTAGTCAAGAGATCGGAAGAGGCGGGGGAGGTGTTGTATACAAAGGCGTATTATCTGATCAAAGACACGCCGCGATAAAGAGACTTTACAATGCTCAACAAGGAGAAGGTGAGTTTCTCGCAGAAGTAGGCATCATTGGAAGACTTAATCACATGAATTTGATTGAAATGTGGGGATATTGCGCCGAGGGAAAATATAGACTATTGGTTTATGAGTACATGGAAAACGGTTCTTTAGCCGAAAATCTATCATCTAATAAACTTGATTGGAGTAAAAGATACAAAATTGCTTTAGCAATAGCAAGAGTTTTAGCATATCTACATGAAGAATGTTTGGAGTGGATTTTACATTGCGATATAAAGCCACAAAACATACTTCTCGATTCTAACTTCCAACCCAAGTTAGCTGATTTCGGATTGTCTAAGCTACAAAATAGAAACAATCTCAACAATTTAAGCGTCTCTACGATTCGAGGAACAAGAGGTTACATGGCACCTGAATGGATTTTCAACTTGCCAATAACATCTAAAGTTGATGTTTATAGCTATGGAATAGTTGTGTTGGAGATGATAACAGGTAAGAGTCCAACAACAGGTTTCAAAGTATTGAATGGTGAAAAGGAAAGTGTTGGGAGGTTGGTTACATGGGTGAGAGAGAAGAAAAGGAGTAGTGTTTGTTGGTTGGAGGAAATTGTTGATGATGAAATGGGATTAGGTTATGATAAAAGTAAGATGGAGATGTTGGCTAAAGTTGCTTTGGATTGTGTTGTGGATGAAAGAGATTTAAGACCTACTATGAGTAGAGTTGTTGAGATGCTTCAATACCATGGAACTGATGGTCAGTGA 2388 0.3777 MKNMDFSFTLFLLVLIFSFQSSSSSSSSLRKGSSLSVENPEDKIISPNGMFTAGFTSIGENAYSFAIWFTEPNSLKLNNTIIWTANRDQPVNGKRSKLTLLNTGNIVLLDVSLNNVWSSNTASLKPLELHLKNDGNLVLRELQGTEILWQSFDSPTDTLLPGQPLTRYTKLVAAISETNHSSGFYMSFFDDENIFGLHYNGRDVSSSYWPRPWLLSWDVGRSNFNSSRTAVLDSLGNFHSSDNFTFSTSDYGSVLQRIMKLDSDGMVRVYSRNNVSKNWYVSWQAFSGTCLVHGICGANSTCSYSPEFGRKCSCIPGYKMRNHDDWSFGCEPMFDFTCNKSESTFLEMKNVEFYGYDFHYIEICNYSTCEDLCIQDCNCVAFQHSFWEKKGFYRCFTKTQLQNGRFVPSFEGSTYLRLPKGNSFSKGESSTPSNHLCLEKLQRVYVKESENHYVKFFLWFVTVIGAFEAVCIFSVWCSLFRSRQKTNADQHGYHLAEIGFRKFSYLELKKATKGFSQEIGRGGGGVVYKGVLSDQRHAAIKRLYNAQQGEGEFLAEVGIIGRLNHMNLIEMWGYCAEGKYRLLVYEYMENGSLAENLSSNKLDWSKRYKIALAIARVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLQNRNNLNNLSVSTIRGTRGYMAPEWIFNLPITSKVDVYSYGIVVLEMITGKSPTTGFKVLNGEKESVGRLVTWVREKKRSSVCWLEEIVDDEMGLGYDKSKMEMLAKVALDCVVDERDLRPTMSRVVEMLQYHGTDGQ 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi305g00010 795 PANTHER OS07G0415500 PROTEIN 8 789 - -
Vivi305g00010 795 FunFam S-receptor-like serine/threonine-protein kinase 482 587 - -
Vivi305g00010 795 ProSiteProfiles Bulb-type lectin domain profile. 20 152 IPR001480 -
Vivi305g00010 795 SMART serkin_6 513 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi305g00010 795 ProSiteProfiles PAN/Apple domain profile. 338 419 IPR003609 -
Vivi305g00010 795 SMART blect_4 26 155 IPR001480 -
Vivi305g00010 795 SUPERFAMILY Protein kinase-like (PK-like) 492 789 IPR011009 -
Vivi305g00010 795 ProSiteProfiles Protein kinase domain profile. 513 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi305g00010 795 CDD STKc_IRAK 532 788 - -
Vivi305g00010 795 Gene3D Phosphorylase Kinase; domain 1 477 587 - -
Vivi305g00010 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 172 IPR036426 -
Vivi305g00010 795 FunFam Putative receptor-like protein kinase 588 793 - -
Vivi305g00010 795 PIRSF SRK 1 793 IPR024171 GO:0004674
Vivi305g00010 795 CDD B_lectin 46 155 IPR001480 -
Vivi305g00010 795 Gene3D Transferase(Phosphotransferase) domain 1 588 793 - -
Vivi305g00010 795 Pfam D-mannose binding lectin 80 167 IPR001480 -
Vivi305g00010 795 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Vivi305g00010 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Vivi305g00010 795 Pfam S-locus glycoprotein domain 240 321 IPR000858 GO:0048544
Vivi305g00010 795 Pfam Protein kinase domain 516 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi305g00010 795 Gene3D - 21 153 IPR036426 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi305g00010 462 787 Receptor kinase-like Gene Family AT1G56120 39.706 1.36e-63 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi305g00010 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi305g00010 - - mtr:11433991 1325.46