Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi305g00009 ATGGCTTATAAAACTTCATACATAATATTCCTAGTCTTGTTATTTTGTTTTCAATGTTCATGTTCTTTATCATCATTGAACAAGGGATCTTTTCTCTCAGTTGAGAAACATGCAGAAGATGTACTTGTTTCTTCAAATGGTTTATTCTCTGCTGGATTCTATCAAGTTGGAGAGAACGCATTTTCCTTTGCCATATGGTTCACAGAGCTGCACAATCACAATCCTAACAATATTGTTTGGATGGCAAACCGTGAACAACCTGTCAATGGTAAACACTCAAAGCTTTTCCTCTTAAGCACGGGAAATATCCTATTGCTTGATGCAGGTCAACTCATCACTTGGTCTTCAAACACAGCTTCAAATGCTCCATTAGAGTTGTATCTCAAAGAGGATGGTAATCTTGTGTTACGCGAGCTTCAAGGAACTACCATTTTGTGGCAAAGCTATGATTTCCCAACAAATACTCTCCTTCCAAATCAACCTCTCACTAGATACACAAAACTTGTTTCCTCAAGAAGCTATGGTAATCATTCTTCTGGCTTCTATAAGTTATTCTTTGACGATAATAATATTATTCGTCTCGACTATGATGGTCCTGATGTTTCAAGCACATATTGGCCACCAGCTTGGATGTCAAATTGGGAAGCTGGAAGATCTAATTACAATAGTAGTAGAACTGCTTTGTTAGATTCTCTTGGAAAGTTCATTTCATCAGATAATTACTTTTTTTCCACATATGATTATGGTACGGTTCTGCAAAGAAGAATAGTGATGGATTCTGATGGTAATATTCGAGTTTACAGTCGAAAAAACTTGTCAGAAAATTGGTATGTTTCATGGCAAGTAATATCTAATACTTGCATCATTCATGGAGTTTGTGGTGCAAATAGTACTTGTAGCTATGATCCTAAAAAGGGTAAGAAATGCTCTTGTTTGCCAGGATTTAAAGTGAAGAGCTACAATGATTGGTCCTATGGTTGTGAACCTATGTTTGATTTTACATGCAAAAGAAATGAGTCTACCTTTTTAAAATTACAGGGTTTTGAGCTATATGGCTATGATGGTAATTTTGTTAAAAATATTACCTACAAAGATTGTGAGAATTTGTGTTTACAACAATGTAACTGTACAGGATTCCAATACACATATGAAGATGGCAGTAACATCTTTAAATGCTACACAAAGCTACAACTGCTGAATGGGAGACATTCACCAAGTTTTCCAGGAACAACTTACTTGAGACTTCCAAAAGGTAAGAACTTCTCAAAACAAGAGTTTGTGAGTGTAAAAGATCATGTTTGTTTGGTGCAGCTTTTCAAAAACTATGTCAAAAAACCAACAAACAATTTGGTGAGGTTTTTTCTGTGGACATCAATTGCAGCTGGTGGTTTAGAATTTGTTCTCTTTGTTGTGGTTTGGGTTTGTTTAAATAAAACCAAGAAAAAGTATAGTGCAAATCAAAATGGCTTTGATCATGCATTTTTGGGATTTAGAAGATATAGTTACTCTGAGTTGAAGGTAGCTACAAAGAATTTTAGTAATGAGATTGGAAGAGGTGGAGGAGGGGTTGTCTATAGAGGTACATTGCCAGATCAAAGAGATGTTGCAATAAAGAGATTGAATGAAGCTAAACAAGGAGAAGGAGAGTTTCAAGCTGAGGTAAGCATCATCGGAAGGCTTAATCATATGAACTTGATTGAAATGTGGGGATATTGTGTTGAAGGTAAGCATAGAATTTTGATATATGAGCACATGGAAAATGGTTCTTTAGGTGAAAATCTTTCATCTAAGACAAACATACTTGATTGGAGTAAAAGGTATGATATTGCTTTAGGAATATCTAGAGTTCTAGCTTATCTACATGAAGAATGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCACAAAATATACTTCTTGATTCTAACTTTCAGCCCAAGTTAGCAGATTTTGGATTGTCTAAGCTAAAAAATAGAAACAATCTCGATAACAATTCAACATTCTCAATGATTAGAGGAACAAGAGGCTACATGGCTCCTGAATGGATTTTCAATTTACCAATAACATCTAAAGTAGATGTTTATAGTTATGGGGTTGTTGTGTTGGAGATGATAACTGGAAAGAATCCAACAATGATGAATATAGAAGGAGACGGTGGAGAAATGGCATATAATGGAAGTTTGATAAGTTGGGTAAGAGAGAAAAAGAGGAGTGCATGTTGGGTGAAAGAAATTTTGGATCCTGCAATAGGGACAAGTTGTGATTTAAGTAAGATGGAAACTTTGGCTAGAGTTGCCTTGGACTGTGTAGAGGAAGATAAGGATATTAGGCCTAATATGAGCCAGGTGGTTGAGATGCTTCAAAATAATGAAAGAGTTGTTGAGTGA 2388 0.3551 MAYKTSYIIFLVLLFCFQCSCSLSSLNKGSFLSVEKHAEDVLVSSNGLFSAGFYQVGENAFSFAIWFTELHNHNPNNIVWMANREQPVNGKHSKLFLLSTGNILLLDAGQLITWSSNTASNAPLELYLKEDGNLVLRELQGTTILWQSYDFPTNTLLPNQPLTRYTKLVSSRSYGNHSSGFYKLFFDDNNIIRLDYDGPDVSSTYWPPAWMSNWEAGRSNYNSSRTALLDSLGKFISSDNYFFSTYDYGTVLQRRIVMDSDGNIRVYSRKNLSENWYVSWQVISNTCIIHGVCGANSTCSYDPKKGKKCSCLPGFKVKSYNDWSYGCEPMFDFTCKRNESTFLKLQGFELYGYDGNFVKNITYKDCENLCLQQCNCTGFQYTYEDGSNIFKCYTKLQLLNGRHSPSFPGTTYLRLPKGKNFSKQEFVSVKDHVCLVQLFKNYVKKPTNNLVRFFLWTSIAAGGLEFVLFVVVWVCLNKTKKKYSANQNGFDHAFLGFRRYSYSELKVATKNFSNEIGRGGGGVVYRGTLPDQRDVAIKRLNEAKQGEGEFQAEVSIIGRLNHMNLIEMWGYCVEGKHRILIYEHMENGSLGENLSSKTNILDWSKRYDIALGISRVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLKNRNNLDNNSTFSMIRGTRGYMAPEWIFNLPITSKVDVYSYGVVVLEMITGKNPTMMNIEGDGGEMAYNGSLISWVREKKRSACWVKEILDPAIGTSCDLSKMETLARVALDCVEEDKDIRPNMSQVVEMLQNNERVVE 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi305g00009 795 SMART serkin_6 510 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi305g00009 795 SMART blect_4 33 152 IPR001480 -
Vivi305g00009 795 FunFam Putative receptor protein kinase ZmPK1 20 151 - -
Vivi305g00009 795 PIRSF SRK 1 795 IPR024171 GO:0004674
Vivi305g00009 795 Pfam PAN-like domain 335 396 IPR003609 -
Vivi305g00009 795 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Vivi305g00009 795 Gene3D Transferase(Phosphotransferase) domain 1 585 794 - -
Vivi305g00009 795 Pfam D-mannose binding lectin 78 164 IPR001480 -
Vivi305g00009 795 CDD B_lectin 42 152 IPR001480 -
Vivi305g00009 795 Gene3D Phosphorylase Kinase; domain 1 473 584 - -
Vivi305g00009 795 PANTHER OS07G0415500 PROTEIN 8 790 - -
Vivi305g00009 795 Pfam Protein kinase domain 513 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi305g00009 795 ProSiteProfiles Protein kinase domain profile. 510 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi305g00009 795 SMART ntp_6 337 415 IPR003609 -
Vivi305g00009 795 Pfam S-locus glycoprotein domain 244 318 IPR000858 GO:0048544
Vivi305g00009 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Vivi305g00009 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 199 IPR036426 -
Vivi305g00009 795 CDD STKc_IRAK 528 789 - -
Vivi305g00009 795 Gene3D - 23 150 IPR036426 -
Vivi305g00009 795 CDD PAN_AP_plant 334 416 - -
Vivi305g00009 795 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
Vivi305g00009 795 FunFam S-receptor-like serine/threonine-protein kinase 478 584 - -
Vivi305g00009 795 SUPERFAMILY Protein kinase-like (PK-like) 494 787 IPR011009 -
Vivi305g00009 795 ProSiteProfiles PAN/Apple domain profile. 335 416 IPR003609 -
Vivi305g00009 795 FunFam Putative receptor-like protein kinase 585 795 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi305g00009 459 793 Receptor kinase-like Gene Family AT1G56120 38.776 1.57e-62 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi305g00009 Pkinase 9.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi305g00009 - - gmx:100784287 1115.91