Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi305g00008 ATGGCTTATAAAACTTCATACATATTCCTAGTCTTGTTATTTCGTTTTCAATGTTCATGTTCTTTATCATCATTGAATAAGGGATCCTATCTCTCAGTTGAGAAACATGCAGAAGATGTACTTGTTTCTTCAAATGGCACATTCTCTGCTGGATTCTATCAAGTTGGAGAGAACGCATTTTCCTTTGCCATATGGTTCACAGAGCTGCACAATCACAACCCTAACAATATTGTTTGGATGGCAAACCGTGAACAACCTGTCAATGGTAAACACTCAAAGCTTTCCCTCTTAAACACAGGAAACATCATCTTGCTTGATGCAGGTCAACTCAACACTTGGTCTTCAAACACAGCTTCAAATGCTCCATTAGAGCTGTATCTCAAAGAGGATGGTAATCTTGTGTTACGTGAGCTTCAAGGAACTACCATCTTGTGGCAAAGCTATGATTTTCCAACAAATACTCTCCTTCCAAATCAACCTCTCACTAGATACACTAAACTTGTTTCCTCAAGAAGTTATAGTAATTATTCTTCTGGCTTCTATAAGTTATTCTTTGACGATAATAATATTCTTCGTCTCGATTATGATGGTCCTGATGTTTCAAGCACATATTGGCCACCAACTTGGATGTCAAGTTGGGAAGCTGGAAGGTTCAATTACAATAGTAGTAGAATTGCTTTGTTAGATTCTCTTGGAAAGTTCATTTCATCAGATAATTACTTTTTTTCCACAAATGATTATGGTACAGTTCTGCAAAGAAGATTAGTGATGGATTCTGATGGTAATATTCGAATTTACAGTCGAAAAAACTTGTCAGGAAATTGGTATGTTTCATGGCAAGTAATATATAATACTTGCATCATTCATGGACTTTGTGGTGCAAATAGCACTTGTAGCTATGATCCTAAAAAGGGTAAGGAATGCTCTTGTTTGCCAGGATATAAAGTGAAGAACTACAACGATTGGTCCTATGGTTGTGAACCTATGTTTAATTTTACATGCAAAAGAAATGAGTCTACCTTTTTAAAATTACGAGGTTTTGAGCTATATGGCTATGATGGTAATTTTATTCAAAATATTACCTACAAAGATTGTAAGAATTTGTGTTTGAAAAAATGTAACTGTATAGGATTCCAATACACATATGATGATGACAGTAACATCTTCAAATGCTATACAAAGCTAGAACTACTGAATGGGAGACATTCACCAAGTTTTCCAGGAACAACTTACTTAAGACTTCCAAAAGGTAAGAACTTCTCAAAACAAGAGTTTGTGAGTGTGAAAGATCATGTTTGTTTGGTGCAGCTATACAAAAACTATGTCAAAAAGCCAACAAACAATTTGGTGAGGTTTTTTCTGTGGACTTCAATTACAGCTGGTGGTTTAGAATTTGTTTACTTTGTTGTGGTTTGGGTTTGTTTAATTAAAACCAAGAAAAAGGCTAGTGCAAACCAAAATAGCTATGATCATGCATTATTGGGATTTAGAAGATATAGTTACTTTGAGTTGAAGGTAGCTACAAATAATTTTATCAATGAGATTGGAAGAGGTGGAGGAGGGGTTGTCTATAAAGGTACATTGCCAGATCAAAGAGATGTTGCAATAAAGAGATTGAATGAAGCTAAACAAGGAGAAGGAGAGTTTCAAGCTGAGGTAAGCATCATAGGAAAGCTTAATCACATGAACTTGATTGAAATGTGGGGATATTGTGTTGAAGGTAAGCATAAAATTTTGGTATATGAGCACATGGAAAATGGTTCTTTAGCTGAAAACCTTTCATCTAAAACCAACACACTTGATTGGAGTAAAAGGTATGATATTGCTTTAGGAATATCTAGAGTTCTAGCATATCTACATGAAGAATGTTTGGAGTGGATTTTGCATTGTGATATAAAACCACAAAATATACTTCTTGATTCTAACTTTCAGCCCAAGTTAGCAGATTTTGGATTGTCTAAGCTGAAAAATAGAAACAATCTCAATAATAATTCAACATTCTCAATGATTAGAGGAACAAGAGGATACATGGCTCCTAAATGGATTTTCAATTTACCAATAACATCTAAAGTTGATGTTTATAGTTATGGGATTGTTGTGTTGGAAATGATAACTGGAAAGAATCCAACAATGATGAATATAGAAGGAGATGATGGAGAAATGGCATATAATGGAAGTTTGATACGTTGGGTTAGAGAGAAAAAGAGGAGTGCATGTTGGGTGAAAGAAATTTTGGATCCTGCAATAGGGACAAGTTGTGATTTAAGTAAGATGGAAATTTTGGCTAGAGTTGCTTTGGACTGTGTAGAGGAAGATATGGATATTAGGCCAAATATGAGCCAGGTTGTTGAGATGCTTCAAAATAATGAAAGAGTTGTTGAGTGA 2385 0.3488 MAYKTSYIFLVLLFRFQCSCSLSSLNKGSYLSVEKHAEDVLVSSNGTFSAGFYQVGENAFSFAIWFTELHNHNPNNIVWMANREQPVNGKHSKLSLLNTGNIILLDAGQLNTWSSNTASNAPLELYLKEDGNLVLRELQGTTILWQSYDFPTNTLLPNQPLTRYTKLVSSRSYSNYSSGFYKLFFDDNNILRLDYDGPDVSSTYWPPTWMSSWEAGRFNYNSSRIALLDSLGKFISSDNYFFSTNDYGTVLQRRLVMDSDGNIRIYSRKNLSGNWYVSWQVIYNTCIIHGLCGANSTCSYDPKKGKECSCLPGYKVKNYNDWSYGCEPMFNFTCKRNESTFLKLRGFELYGYDGNFIQNITYKDCKNLCLKKCNCIGFQYTYDDDSNIFKCYTKLELLNGRHSPSFPGTTYLRLPKGKNFSKQEFVSVKDHVCLVQLYKNYVKKPTNNLVRFFLWTSITAGGLEFVYFVVVWVCLIKTKKKASANQNSYDHALLGFRRYSYFELKVATNNFINEIGRGGGGVVYKGTLPDQRDVAIKRLNEAKQGEGEFQAEVSIIGKLNHMNLIEMWGYCVEGKHKILVYEHMENGSLAENLSSKTNTLDWSKRYDIALGISRVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLKNRNNLNNNSTFSMIRGTRGYMAPKWIFNLPITSKVDVYSYGIVVLEMITGKNPTMMNIEGDDGEMAYNGSLIRWVREKKRSACWVKEILDPAIGTSCDLSKMEILARVALDCVEEDMDIRPNMSQVVEMLQNNERVVE 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi305g00008 794 SUPERFAMILY Protein kinase-like (PK-like) 490 786 IPR011009 -
Vivi305g00008 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Vivi305g00008 794 FunFam Putative receptor-like protein kinase 584 794 - -
Vivi305g00008 794 PIRSF SRK 1 794 IPR024171 GO:0004674
Vivi305g00008 794 CDD STKc_IRAK 515 788 - -
Vivi305g00008 794 Gene3D Transferase(Phosphotransferase) domain 1 584 793 - -
Vivi305g00008 794 ProSiteProfiles Protein kinase domain profile. 509 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi305g00008 794 ProSiteProfiles Bulb-type lectin domain profile. 16 148 IPR001480 -
Vivi305g00008 794 Pfam PAN-like domain 334 394 IPR003609 -
Vivi305g00008 794 CDD B_lectin 41 151 IPR001480 -
Vivi305g00008 794 FunFam Putative receptor protein kinase ZmPK1 19 150 - -
Vivi305g00008 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 169 IPR036426 -
Vivi305g00008 794 PANTHER OS07G0415500 PROTEIN 9 789 - -
Vivi305g00008 794 CDD PAN_AP_plant 333 415 - -
Vivi305g00008 794 Gene3D - 22 150 IPR036426 -
Vivi305g00008 794 SMART blect_4 32 151 IPR001480 -
Vivi305g00008 794 Pfam D-mannose binding lectin 77 164 IPR001480 -
Vivi305g00008 794 Pfam S-locus glycoprotein domain 234 317 IPR000858 GO:0048544
Vivi305g00008 794 ProSitePatterns Protein kinases ATP-binding region signature. 515 537 IPR017441 GO:0005524
Vivi305g00008 794 Pfam Protein kinase domain 512 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi305g00008 794 ProSiteProfiles PAN/Apple domain profile. 334 415 IPR003609 -
Vivi305g00008 794 Gene3D Phosphorylase Kinase; domain 1 472 583 - -
Vivi305g00008 794 SMART serkin_6 509 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi305g00008 794 FunFam S-receptor-like serine/threonine-protein kinase 478 583 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi305g00008 467 789 Receptor kinase-like Gene Family AT4G23140 37.168 2.80e-60 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi305g00008 Pkinase 3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi305g00008 - - gmx:100784823 1106.28