Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi305g00001 ATGAGTTGCTTTTCATGTTTCTCCAACCAAGAAAAGAAAGTACCAAGGAGGCCTAATAACAACAACAATAACAATGGAAAAAGGATACAATATGCTCCTACTCAAATATCTCCTAAGAAAGCACCTCAACCTAACCATCATCATCATCATCATCAAGAGAATCATAACTATAAGGCTAGGACAAGCCCACAAAGAGAACCTAGAATAAATAAAGAGGCTAACAAAGAAAATGGTGGTGGTAACAACATTGCTGCACAATCATTCACATTCAGGGAATTGGCTTCTATCACAAGGAACTTTAGGCAAGAAAATCTAATAGGTGAAGGTGGGTTTGGAAGAGTTTATAGAGGAAGACTTGAAAAAACAAACCAGGAAGTAGCTGTGAAGCAACTTGACAGGAATGGACTACAAGGAAATAGGGAGTTTCTTGTTGAAGTTTTGATGCTAAGCCTCTTACACCATCATAATCTAGTGAGTCTAATTGGATATTGTGCTGATGGAGAGCAAAGACTATTGGTATATGAGTACATGCCATTAGGATCTCTTGAAGATCATCTACTTGATCTTCCACGAAGACAAAAGCCATTAGAATGGTTCAAAAGAATGAAAGTAGCACTGGATGCTGCAAAAGGTTTAGAGTATTTGCATGATAGAGCGAATCCACCCGTGATATACCGCGACTTAAAATCCTCCAACATTTTACTAGACAATGGTTTTAATGCAAAACTATCTGATTTTGGATTAGCTAAACTTGGACCTACAGGTGACAAGTCTCATGTTTCTTCAAGAGTAATGGGAACTTATGGATACTGTGCACCTGAGTATCAAAGAACTGGTCAACTCACTGTTAAATCAGATATATACAGCTTTGGCGTTGTTTTGCTTGAATTGATTACTGGTAGGAGAACTATTGATAACACAAGACCTTTAAGGGAGCAAAATCTTGTTACTTGGGCGTATCCAGTATTCAGGGAACCAGCAAGGTATTCAGAATTGGCGGATCCAAAGCTTGAAGGAAGCTTTCCGATGAGATCGTTACATCAAGCAGTGGCAGTAGCAGCAATGTGTCTAAACGAAGAACCATCAGTGAGACCATTGATAAGTGATGTTGTAACAGCTCTTAGTTTCCTTAATCCAATGAACCAAGATCAACAAGTTTTGTCACCAATTGATATGCCATCACCAACAGAAGAAAATAGCGCAACGTTGAGTCTTCTTGACGATGACAGTGCTGTCGAACGACAAAGAGCCGTTGATGAAGCCATTGAATGGGGCTCAAATACTAGGAATAAACCAACAAGGCTTGACAGTGCTTCATCTATTTAA 1326 0.3906 MSCFSCFSNQEKKVPRRPNNNNNNNGKRIQYAPTQISPKKAPQPNHHHHHHQENHNYKARTSPQREPRINKEANKENGGGNNIAAQSFTFRELASITRNFRQENLIGEGGFGRVYRGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHHNLVSLIGYCADGEQRLLVYEYMPLGSLEDHLLDLPRRQKPLEWFKRMKVALDAAKGLEYLHDRANPPVIYRDLKSSNILLDNGFNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDIYSFGVVLLELITGRRTIDNTRPLREQNLVTWAYPVFREPARYSELADPKLEGSFPMRSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLNPMNQDQQVLSPIDMPSPTEENSATLSLLDDDSAVERQRAVDEAIEWGSNTRNKPTRLDSASSI 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi305g00001 441 MobiDBLite consensus disorder prediction 1 83 - -
Vivi305g00001 441 Gene3D Transferase(Phosphotransferase) domain 1 177 391 - -
Vivi305g00001 441 MobiDBLite consensus disorder prediction 1 41 - -
Vivi305g00001 441 MobiDBLite consensus disorder prediction 56 73 - -
Vivi305g00001 441 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Vivi305g00001 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Vivi305g00001 441 FunFam Serine/threonine-protein kinase PBS1 177 390 - -
Vivi305g00001 441 ProSiteProfiles Protein kinase domain profile. 100 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi305g00001 441 Pfam Protein kinase domain 101 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi305g00001 441 SUPERFAMILY Protein kinase-like (PK-like) 86 403 IPR011009 -
Vivi305g00001 441 Gene3D Phosphorylase Kinase; domain 1 84 176 - -
Vivi305g00001 441 PANTHER OS07G0668900 PROTEIN 3 384 - -
Vivi305g00001 441 SMART serkin_6 100 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi305g00001 441 FunFam Serine/threonine-protein kinase PBS1 71 176 - -
Vivi305g00001 441 CDD STKc_IRAK 106 374 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi305g00001 1 429 Glycoside Hydrolase AT3G07070 63.889 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vivi305g00001 Pkinase 7.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi305g00001 - - psat:127127708 763.837