Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi304g00059 ATGGACGATGATTCGCTTCAAAGGGGAGATCACATTTCAACATCAATAAATCAAGCCATCGAAGAATCTCAAATTTCTGTGATTGTTTTTTCAAGAAATTATGCAGATTCACGTTGGTGTTTAGATGAGTTGGTGAAGATAATGGAGTGTCGCAGAACCATAGGTCAGGTGGTTTTACCTGTGTTTTACGATGTAGATCCTTCTGAGGTACGTCATCAGAAAGGCGAGTTTGGAAAAGCATTTCAAAGTCATTTGAGTAGACTTTCAAATAAGGAAGGAAGTCAAGACAGGTATGGAAAATCAGTTCGAAACTTTTTAAACAGTCTGTCTATCTTTAAAGACAAGTCAGAGAAACAAGTGCTGAAACGGTGTTGGAGCGCGGCGCTTCGTGAGGCAACAGGGCTTGCTGGGTTTACAGTGCTAAATTCCAGGAACGAAAGTGAGGCTGTCAAGGATATTGTTGACAAAGTTAAATATTTGTTAAACAAGAAAGATATGTTCATTCTTAATAATCCAGTGGGAGTTGAACCTCGAGTGTCAGATATAATTCAACTACTAGACATCCAACAAACAAATGATGTTCTTCTACTAGGAATGTGGGGCATGGGAGGAATTGGCAAAACCACCATTGCAAAAGCTGTTTGCAATAAAATTGGCTATAATTTTGAAGGTAAGAGCTTCCTTCTAAATATTAGGGAGGTTTGGGAGTCAAATGGTGGAAAAGTGTCTTTACAACAGCAACTTCTCTATGGTATTTGTAAAGAAAACGAAACCAAGATACAAAATGTTGAGGAAGGGAAAAAAATATTGATGGATAAACTTTGTCATAAAAAAGTACTTCTCGTACTTGATGATGTGAATACACTGGATCAATTGAATGCTTTGTGTGGAAGTCGAAAATGGTTTGGTTCGGGGAGTAGAATAATCATCACAACTAGAGATGAACATATACTTAGAGCGATTAGAGTCGACAGATTATACACAATGAAAGAAATGGATAAAAGTGAATCAGTTGAGCTTTTTAGTTGGCATGCGTTCAAGCAAGCGAGACCTACAGAAGATTTTGCTGGAGTTTCCTTAAACGTAGTTGAGTATTCTGGGGGATTGCCGCTAGCTTTGGAAGTTCTTGGGTCATATTTGTTTGAAAGGGGGATAGTAGAGTGGAAGTGTGCATTGGACAAGCTCAGAAGAATTCCCAATGATGAAGTGCAGAAGAAATTAAAAATAAGCTATGATGGTTTAAATGATGATACAGAGAAAGAAATATTCCTTGACGTAGCATGTTTCTTTATTGGAATGGACCGAAATGAAGTTATACTTATATTAAATGGTTGTGGACTTTTCGCAGAAATTGGGATAAGTATCCTAGTTGAGCGATGCCTTATAACTGTTGATCATAAGAACAGACTTGGAATGCATGATTTGGTACGAGATATGGGAAGAGAAATCATTCGTGAGGAATCACTAAAAGAGCCTGGAGAGCGTAGCAGGTTGTGGTTTAGTGAAGATGTGCTTAATGTATTGTCAAGCGAAACTGGAACAAAAGTTGTTGAGGGACTGGCTTTGAAGTTGCCAAGAGCTAATGCAAAATGTTTTAGGACTAAAGTATTTACGAAGATGACGAGACTCAGGTTCCTTCAACTTACTGGAGTACAACTTAATGGAGATTTTGAATGCCTCTCAAGAAATCTGAGATGGCTTTCTTGGAATGGATTTCCTTTAAAATGCTTACCTACGAGCTTTTATCAAGAAAATTTAGTTTCTATTGTGTTAGAAAACAGCAATGTCAAACTTCTATGGAAAGTAACTCAGAGGTTGGAAAACCTTAAAATTCTCAATCTTAGTCATTCTCATTATCTGAAACAAACTCCGGATTTTTCAAACTTGCCTAATCTTGAACAGTTAGTACTCATAGATTGTCCGAAGTTGTCTGAGGTTTCGCCTAGTATTGGACATCTAAGTAAAATTCTTCTGATAAATTTGGAAGACTGTACTAGTCTTCATAGCCTTCCAAGAAGTATCTATAAGTTGAAATCTCTGAAAACTCTCATTCTTTCCGGGTGTTCAGCTATTGACAAGTTGGAAGAAGACTTAGAACAGATGGAATCTTTAACCACTCTACTCGCAAATAACACTGCAATAACAAGAGTTCCGTTTTCAATAGTAAGATCAAAAAGCATTGGATATATTTCTTTGTGCGGCCATGAAGGATTTTCACGTAATGTCTTTCCATCTATCATTTGGTCTTGGATGTCACCGACAAGCAATCTCCCATCTCCATTTCAAACATCTGCCGTCACGTCGTCCTTGGTTCCATTAGATGTACCAAATAGTAGTTCCCATGAACTATTGTCTATGTCCAAGTACCTTCCGTGGCTTCGATGTCTTTGGGTGGAGTGCGGATCAGCACTTCAACTTGCTCAAGACTCAAAAAGAATTTTGGATGCCTTATATGCCACAAATTTTACAGAATTGGAATCAACTTCATCACAAGTTTCAAATGTGAAAGCTCATGCGTTACATCAATACTACTGTCAAGTGCACATTTCAGAATCAAATACTTTCTTGAGATCTCTTTTTATTCAAATGGGAATGAGTTGCCAAGTCACTAATGTTTTGAAAGAGAAGATTTTACAGAATATGGGCGTTAATCGCCATGGTGGTTGTTTGCTTCCCAGTGATAGTTATCCAAACTGGTTAACCTTCAATTGCAAAGGTTCTTCTGTAATTTTTGAAGTCCCTCGAGTGCAGGGGCGAAACTTAAAGACAATGATATGCATTGTCGACTCTTCAACCGCGGATAATATAGCATCAGATGGTCTTAAAAATATGTTGGTGAAAAATTACACAAAGGCCACCATTCAGCTCTATAAGAGAGAGGCATTAGTCTCATTTGATAATGAGGAGAGACAGAGCTTAGTATCAAGTATAGAACCAGGTAACAAAGTCGAGGTTATTGTTGTTTTTGAGAACAATTTCATTGTTAAGAAGGTAACAATTTATCTCATATATGATGAACCAAATGGAAAAGTAATTGCTTAA 3042 0.3748 MDDDSLQRGDHISTSINQAIEESQISVIVFSRNYADSRWCLDELVKIMECRRTIGQVVLPVFYDVDPSEVRHQKGEFGKAFQSHLSRLSNKEGSQDRYGKSVRNFLNSLSIFKDKSEKQVLKRCWSAALREATGLAGFTVLNSRNESEAVKDIVDKVKYLLNKKDMFILNNPVGVEPRVSDIIQLLDIQQTNDVLLLGMWGMGGIGKTTIAKAVCNKIGYNFEGKSFLLNIREVWESNGGKVSLQQQLLYGICKENETKIQNVEEGKKILMDKLCHKKVLLVLDDVNTLDQLNALCGSRKWFGSGSRIIITTRDEHILRAIRVDRLYTMKEMDKSESVELFSWHAFKQARPTEDFAGVSLNVVEYSGGLPLALEVLGSYLFERGIVEWKCALDKLRRIPNDEVQKKLKISYDGLNDDTEKEIFLDVACFFIGMDRNEVILILNGCGLFAEIGISILVERCLITVDHKNRLGMHDLVRDMGREIIREESLKEPGERSRLWFSEDVLNVLSSETGTKVVEGLALKLPRANAKCFRTKVFTKMTRLRFLQLTGVQLNGDFECLSRNLRWLSWNGFPLKCLPTSFYQENLVSIVLENSNVKLLWKVTQRLENLKILNLSHSHYLKQTPDFSNLPNLEQLVLIDCPKLSEVSPSIGHLSKILLINLEDCTSLHSLPRSIYKLKSLKTLILSGCSAIDKLEEDLEQMESLTTLLANNTAITRVPFSIVRSKSIGYISLCGHEGFSRNVFPSIIWSWMSPTSNLPSPFQTSAVTSSLVPLDVPNSSSHELLSMSKYLPWLRCLWVECGSALQLAQDSKRILDALYATNFTELESTSSQVSNVKAHALHQYYCQVHISESNTFLRSLFIQMGMSCQVTNVLKEKILQNMGVNRHGGCLLPSDSYPNWLTFNCKGSSVIFEVPRVQGRNLKTMICIVDSSTADNIASDGLKNMLVKNYTKATIQLYKREALVSFDNEERQSLVSSIEPGNKVEVIVVFENNFIVKKVTIYLIYDEPNGKVIA 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi304g00059 1013 ProSiteProfiles TIR domain profile. 1 161 IPR000157 GO:0007165
Vivi304g00059 1013 Gene3D Ribonuclease Inhibitor 520 757 IPR032675 -
Vivi304g00059 1013 PRINTS Disease resistance protein signature 273 287 - -
Vivi304g00059 1013 PRINTS Disease resistance protein signature 675 691 - -
Vivi304g00059 1013 PRINTS Disease resistance protein signature 196 211 - -
Vivi304g00059 1013 PRINTS Disease resistance protein signature 366 380 - -
Vivi304g00059 1013 Pfam NB-ARC domain 178 411 IPR002182 GO:0043531
Vivi304g00059 1013 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 85 IPR035897 -
Vivi304g00059 1013 Gene3D - 167 326 IPR027417 -
Vivi304g00059 1013 SMART till_3 1 135 IPR000157 GO:0007165
Vivi304g00059 1013 Pfam TIR domain 2 91 IPR000157 GO:0007165
Vivi304g00059 1013 Gene3D - 331 415 IPR042197 -
Vivi304g00059 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 425 IPR027417 -
Vivi304g00059 1013 SMART AAA_5 193 336 IPR003593 GO:0016887
Vivi304g00059 1013 Coils Coil 691 711 - -
Vivi304g00059 1013 SUPERFAMILY L domain-like 472 798 - -
Vivi304g00059 1013 Gene3D - 1 166 IPR035897 -
Vivi304g00059 1013 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 823 IPR044974 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi304g00059 7 721 WRKY Transcription Factor Family AT4G12020 31.471 2.36e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi304g00059 - - vvo:131628707 1988.39