Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi304g00058 ATGTCTTCTTTGAAAGATCGCCGACAACGTAGAGATGTTGGTCTTGATGAAATGGCTGAAGCATTTATAAGTAATTTTAATAGAGTGATTCGTGAATATGAAGTGTTCTTAAGTTTCAGAGGAGAAGATACTCGTGCATCTTTCACTTCACATCTCCATGCTGCTCTTCGGAACGCTGGAATCTCCGTTTTCATGGACGATGATTCGCTTCAAAGGGGAGATCACATTTCAACATCAATAAATCAAGCCATCGAAGAATCTCAAATTTCTGTGATTGTTTTTTCAAGAAATTATGCAGATTCACGTTGGTGTTTAGATGAGTTGGTGAAGATAATGGAGTGTCGCAGAACCATAGGTCAGGTGGTTTTACCTGTGTTTTACGATGTAGATCCTTCTGAGGTACGTCATCAGAAAGGCGAGTTTGGAAAAGCATTTCAAAGTCATTTGAGTAGACTTTCAAATAAGGAAGGAAGTCAAGACAGGTATGGAAAATCAGTTCGAAACTTTTTAAACAGTCTGTCTATCTTTAAAGACAAGTCAGAGAAACAAGTGCTGAAACGGTGTTGGAGCGCGGCGCTTCGTGAGGCAACAGGGCTTGCTGGGTTTACAGTGCTAAATTCCAGGAACGAAAGTGAGGCTGTCAAGGATATTGTTGACAAAGTTAAATATTTGTTAAACAAGAAAGATATGTTCATTCTTAATAATCCAGTGGGAGTTGAACCTCGAGTGTCAGATATAATTCAACTACTAGACATCCAACAAACAAATGATGTTCTTCTACTAGGAATGTGGGGCATGGGAGGAATTGGCAAAACCACCATTGCAAAAGCTGTTTGCAATAAAATTGGCTATAATTTTGAAGGTAAGAGCTTCCTTCTAAATATTAGGGAGGTTTGGGAGTCAAATGGTGGAAAAGTGTCTTTACAACAGCAACTTCTCTATGGTATTTGTAAAGAAAACGAAACCAAGATACAAAATGTTGAGGAAGGGAAAAAAATATTGATGGATAAACTTTGTCATAAAAAAGTACTTCTCGTACTTGATGATGTGAATACACTGGATCAATTGAATGCTTTGTGTGGAAGTCGAAAATGGTTTGGTTCGGGGAGTAGAATAATCATCACAACTAGAGATGAACATATACTTAGAGCGATTAGAGTCGACAGATTATACACAATGAAAGAAATGGATAAAAGTGAATCAGTTGAGCTTTTTAGTTGGCATGCGTTCAAGCAAGCGAGACCTACAGAAGATTTTGCTGGAGTTTCCTTAAACGTAGTTGAGTATTCTGGGGGATTGCCGCTAGCTTTGGAAGTTCTTGGGTCATATTTGTTTGAAAGGGGGATAGTAGAGTGGAAGTGTGCATTGGACAAGCTCAGAAGAATTCCCAATGATGAAGTGCAGAAGAAATTAAAAATAAGCTATGATGGTTTAAATGATGATACAGAGAAAGAAATATTCCTTGACGTAGCATGTTTCTTTATTGGAATGGACCGAAATGAAGTTATACTTATATTAAATGGTTGTGGACTTTTCGCAGAAATTGGGATAAGTATCCTAGTTGAGCGATGCCTTATAACTGTTGATCATAAGAACAGACTTGGAATGCATGATTTGGTACGAGATATGGGAAGAGAAATCATTCGTGAGGAATCACTAAAAGAGCCTGGAGAGCGTAGCAGGTTGTGGTTTAGTGAAGATGTGCTTAATGTATTGTCAAGCGAAACTGGAACAAAAGTTGTTGAGGGACTGGCTTTGAAGTTGCCAAGAGCTAATGCAAAATGTTTTAGGACTAAAGTATTTACGAAGATGACGAGACTCAGGTTCCTTCAACTTACTGGAGTACAACTTAATGGAGATTTTGAATGCCTCTCAAGAAATCTGAGATGGCTTTCTTGGAATGGATTTCCTTTAAAATGCTTACCTACGAGCTTTTATCAAGAAAATTTAGTTTCTATTGTGTTAGAAAACAGCAATGTCAAACTTCTATGGAAAGTAACTCAGAGGTTGGAAAACCTTAAAATTCTCAATCTTAGTCATTCTCATTATCTGAAACAAACTCCGGATTTTTCAAACTTGCCTAATCTTGAACAGTTAGTACTCATAGATTGTCCGAAGTTGTCTGAGGTTTCGCCTAGTATTGGACATCTAAGTAAAATTCTTCTGATAAATTTGGAAGACTGTACTAGTCTTCATAGCCTTCCAAGAAGTATCTATAAGTTGAAATCTCTGAAAACTCTCATTCTTTCCGGGTGTTCAGCTATTGACAAGTTGGAAGAAGACTTAGAACAGATGGAATCTTTAACCACTCTACTCGCAAATAACACTGCAATAACAAGAGTTCCGTTTTCAATAGTAAGATCAAAAAGCATTGGATATATTTCTTTGTGCGGCCATGAAGGATTTTCACGTAATGTCTTTCCATCTATCATTTGGTCTTGGATGTCACCGACAAGCAATCTCCCATCTCCATTTCAAACATCTGCCGTCACGTCGTCCTTGGTTCCATTAGATGTACCAAATAGTAGTTCCCATGAACTATTGTCTATGTCCAAGTACCTTCCGTGGCTTCGATGTCTTTGGGTGGAGTGCGGATCAGCACTTCAACTTGCTCAAGACTCAAAAAGAATTTTGGATGCCTTATATGCCACAAATTTTACAGAATTGGAATCAACTTCATCACAAGTTTCAAATGTGAAAGCTCATGCGTTACATCAATACTACTGTCAAGTGCACATTTCAGAATCAAATACTTTCTTGAGATCTCTTTTTATTCAAATGGGAATGAGTTGCCAAGTCACTAATGTTTTGAAAGAGAAGATTTTACAGAATATGGGCGTTAATCGCCATGGTGGTTGTTTGCTTCCCAGTGATAGTTATCCAAACTGGTTAACCTTCAATTGCAAAGGTTCTTCTGTAATTTTTGAAGTCCCTCGAGTGCAGGGGCGAAACTTAAAGACAATGATATGCATTGTCGACTCTTCAACCGCGGATAATATAGCATCAGATGGTCTTAAAAATATGTTGGTGAAAAATTACACAAAGGCCACCATTCAGCTCTATAAGAGAGAGGCATTAGTCTCATTTGATAATGAGGAGAGACAGAGCTTAGTATCAAGTATAGAACCAGGTAACAAAGTCGAGGTTATTGTTGTTTTTGAGAACAATTTCATTGTTAAGAAGGTAACAATTTATCTCATATATGATGAACCAAATGGAAAAGTAATTGCTTAA 3234 0.376 MSSLKDRRQRRDVGLDEMAEAFISNFNRVIREYEVFLSFRGEDTRASFTSHLHAALRNAGISVFMDDDSLQRGDHISTSINQAIEESQISVIVFSRNYADSRWCLDELVKIMECRRTIGQVVLPVFYDVDPSEVRHQKGEFGKAFQSHLSRLSNKEGSQDRYGKSVRNFLNSLSIFKDKSEKQVLKRCWSAALREATGLAGFTVLNSRNESEAVKDIVDKVKYLLNKKDMFILNNPVGVEPRVSDIIQLLDIQQTNDVLLLGMWGMGGIGKTTIAKAVCNKIGYNFEGKSFLLNIREVWESNGGKVSLQQQLLYGICKENETKIQNVEEGKKILMDKLCHKKVLLVLDDVNTLDQLNALCGSRKWFGSGSRIIITTRDEHILRAIRVDRLYTMKEMDKSESVELFSWHAFKQARPTEDFAGVSLNVVEYSGGLPLALEVLGSYLFERGIVEWKCALDKLRRIPNDEVQKKLKISYDGLNDDTEKEIFLDVACFFIGMDRNEVILILNGCGLFAEIGISILVERCLITVDHKNRLGMHDLVRDMGREIIREESLKEPGERSRLWFSEDVLNVLSSETGTKVVEGLALKLPRANAKCFRTKVFTKMTRLRFLQLTGVQLNGDFECLSRNLRWLSWNGFPLKCLPTSFYQENLVSIVLENSNVKLLWKVTQRLENLKILNLSHSHYLKQTPDFSNLPNLEQLVLIDCPKLSEVSPSIGHLSKILLINLEDCTSLHSLPRSIYKLKSLKTLILSGCSAIDKLEEDLEQMESLTTLLANNTAITRVPFSIVRSKSIGYISLCGHEGFSRNVFPSIIWSWMSPTSNLPSPFQTSAVTSSLVPLDVPNSSSHELLSMSKYLPWLRCLWVECGSALQLAQDSKRILDALYATNFTELESTSSQVSNVKAHALHQYYCQVHISESNTFLRSLFIQMGMSCQVTNVLKEKILQNMGVNRHGGCLLPSDSYPNWLTFNCKGSSVIFEVPRVQGRNLKTMICIVDSSTADNIASDGLKNMLVKNYTKATIQLYKREALVSFDNEERQSLVSSIEPGNKVEVIVVFENNFIVKKVTIYLIYDEPNGKVIA 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi304g00058 1077 SMART till_3 32 199 IPR000157 GO:0007165
Vivi304g00058 1077 Gene3D - 233 390 IPR027417 -
Vivi304g00058 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 489 IPR027417 -
Vivi304g00058 1077 PRINTS Disease resistance protein signature 430 444 - -
Vivi304g00058 1077 PRINTS Disease resistance protein signature 337 351 - -
Vivi304g00058 1077 PRINTS Disease resistance protein signature 260 275 - -
Vivi304g00058 1077 PRINTS Disease resistance protein signature 739 755 - -
Vivi304g00058 1077 Pfam TIR domain 33 155 IPR000157 GO:0007165
Vivi304g00058 1077 SUPERFAMILY Toll/Interleukin receptor TIR domain 31 149 IPR035897 -
Vivi304g00058 1077 Gene3D Ribonuclease Inhibitor 565 948 IPR032675 -
Vivi304g00058 1077 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 888 IPR044974 GO:0006952
Vivi304g00058 1077 ProSiteProfiles TIR domain profile. 31 225 IPR000157 GO:0007165
Vivi304g00058 1077 Pfam NB-ARC domain 242 475 IPR002182 GO:0043531
Vivi304g00058 1077 FunFam Disease resistance protein (TIR-NBS-LRR class) 29 227 - -
Vivi304g00058 1077 SMART AAA_5 257 400 IPR003593 GO:0016887
Vivi304g00058 1077 SUPERFAMILY L domain-like 536 862 - -
Vivi304g00058 1077 Coils Coil 755 775 - -
Vivi304g00058 1077 Gene3D - 30 232 IPR035897 -
Vivi304g00058 1077 Gene3D - 395 479 IPR042197 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi304g00058 31 785 WRKY Transcription Factor Family AT4G12020 31.177 8.06e-88 309