Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi304g00048 ATGTATACATATACATTCTATTTGTGTAGGAATGAAAGTGAAGATATCAAAAAAATTGTTGACAATGTTTCACATTTGCTCAACAAGACAGACTTGTTTATTGCCCATAATCCTGTGGGAGTTGAATCTCGAGTACAAGATGTGACTCAACTTCTTCTACCCATTCAACCAAATGAAGTTCTACTACTAGGGATGTGGGGTATGGGGGGAATTGGAAAATCAACCATTGCAAAAGCCATTTACAATGAGATTGGCCGCAATTTTAAAGGTAGGAGCTTCCTTGCTAATATTAGGGAAAATGGGGAGAAAATAGATGGACTACTGGGTTTGCTAAAGCAACTTCTATTTGATATCTGCAAAGAAACGACAATCAAGATACCTAACATCGAGTCAGGAATGAACACATTGCAGCGTAAACTCAGTAACAAAAAAGTACTCATTGTACTTGATGATGTGACTACGTTAGACCAATTGCATACTTTCTGTGGAAGTTGCAAATGGTTTGGTCCAGGGAGTATAATAATCATCACAACCAGAGATATGCATTTACTTAAATGGAGAGTTGACAAAATATACAAAATGACAACAATGAATGAAAGTGAATCAATTGAGCTTTTTTGTTGGAATGCATTCAAGCAAGCAACTCATACTAGAGATTTTGATAGAATTTCCAGAAATGTTGTTAAATATTCGGAGGGGTTGCCACTAGCCCTTGAAGTCCTTGGGTCTTATTTGTATAATAAGACGGAGTCGGAGTGGGAACTTGTATTGGAGAAACTCCAAAGAATTCCTAATAACCAAGTGCAAAATAAGTTAAGAATAAGTTATGACGGTTTAAATGATGATGATGAACAAGAAATATTCCTTGATATAGCTTGTTTCTTTATTGGGATGGACCAAAATGATGTTATACTTGTATTAAATGACTGTGGACTTTCTACTGAAATTGGAATAAGGGTCCTTGTGGAGCGAAGCCTTGTGACTGTTGATGATAAGAACATTCTTGGAATGCATGGTTTGATGCGAGATATGGGAAGAGAAATCATTCGTGGGAAATCACCAAGGAGGCCTGAGGAACGCAGTAGATTGTGGTTTCATGAGGATGTGGTTGACGTATTATCAAGACAAAATGTAAAAACTTCATATATACTATTTTCTTAA 1161 0.3635 MYTYTFYLCRNESEDIKKIVDNVSHLLNKTDLFIAHNPVGVESRVQDVTQLLLPIQPNEVLLLGMWGMGGIGKSTIAKAIYNEIGRNFKGRSFLANIRENGEKIDGLLGLLKQLLFDICKETTIKIPNIESGMNTLQRKLSNKKVLIVLDDVTTLDQLHTFCGSCKWFGPGSIIIITTRDMHLLKWRVDKIYKMTTMNESESIELFCWNAFKQATHTRDFDRISRNVVKYSEGLPLALEVLGSYLYNKTESEWELVLEKLQRIPNNQVQNKLRISYDGLNDDDEQEIFLDIACFFIGMDQNDVILVLNDCGLSTEIGIRVLVERSLVTVDDKNILGMHGLMRDMGREIIRGKSPRRPEERSRLWFHEDVVDVLSRQNVKTSYILFS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi304g00048 386 Gene3D - 196 280 IPR042197 -
Vivi304g00048 386 Gene3D - 11 191 IPR027417 -
Vivi304g00048 386 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 373 IPR044974 GO:0006952
Vivi304g00048 386 SUPERFAMILY "Winged helix" DNA-binding domain 267 373 IPR036390 -
Vivi304g00048 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 291 IPR027417 -
Vivi304g00048 386 PRINTS Disease resistance protein signature 231 245 - -
Vivi304g00048 386 PRINTS Disease resistance protein signature 62 77 - -
Vivi304g00048 386 PRINTS Disease resistance protein signature 139 153 - -
Vivi304g00048 386 Pfam NB-ARC domain 42 269 IPR002182 GO:0043531
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi304g00048 39 364 WRKY Transcription Factor Family AT5G45050 36.280 6.70e-57 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi304g00048 - - vvo:131628712 759.599