Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi304g00046 ATGGAGAATGAAAAGCCTCCCTCATCCTCCTCATCAAAGTTAGGATTTTCACCAAACGACCAAGTGTTTGGGCGGCGTAATAGGCCAGAACCAGAACCAGAAATAAAGATACATGACGTGTTCTTGAGTTTCAGAGGAGAAGATACTCGCGCTTCCTTCACTTCACATCTCTGTACTGCTCTTCAAAATGCCGGAATTAAGGTTTTTATTGACGATAATGACCTTCAAAAAGGAGATCATATTTCACCATCATTACACCTAGCAATCGAGCAGTCTCAGATTTCTATAGTTGTTTTCTCAATAAATTATCCGGATTCACGATGGTGTCTCGATGAATTGGGAAAAATAATTGAGTGTTGCAGAACCACAAAGCATGTAGTTGTGCCAGTGTTTTACCATGTAGATCCCTCTGAAGTGCGTTATCAGAGGGGCGATTTTGGAGTATCTTTTCAACGTCTTTTGAACAAAATGGAAAAGGAGGTAGATTTGGATTTACTGTGTGAAAAGAGATGGAGAGTGATGCTTCGTCTGGCAGCTAACACCGCAGGGTTCGTAATACTAAACTCCAGGAATGAAAGTGAGGATATCAAAACAATCGTTGACAAAGTTTCACATTTGCTAAATAAGTCAGACTTGTTTATTGCACATAATCCCGTGGGAATTGAATCTCGAGTGCAAGATGTCATTCAACTTCTACCCATTCAATCAAATGATGTTTTACTACTAGGGATGTGGGGCATGGGGGGAATTGGCAAAACAACCATCGCAAAAGCCATTTACAATAAAATTGGCTGCAATTTTGAAGGTAGGAGCTTCATTGCTAATATTAGGGAAAATGGGGAGAAAATTAATGGACTAGTGAGTTTACAAGAGCAACTTCTATTTGATATCTGCAAAGAAACGGCAATCAAGATACCAAACATTCAGTCAGGAATAACAATGTTACGGTCTAGACTCAGCTTAAAAAAAGTACTCATTGTACTTGATGATATAAATACGTTAGAACAACTGCATGCTTTTTGTGGAAGTTTTAGATATCCAGAATGGTTTGGTCCAAGGAGTATAATAATTATCACAACCAGAGATAAGCGTTTACTTAAGGGGAGAGTTGACAAAATATACAATATGTCAATAATGACTGAAAGTGAATCACTAGAGCTTTTTAGTTGGAATGCATTCAAGCAAGCGAGTCCAATGGGAGATTTTGATAGAATTTCCAGAAATGTAGTTAAATATTCTGAGGGATTGCCGCTAGCCCTTGAAGTCCTTGGGTCGTATTTGTATCATAAGACGGAATCGGAATGGGAACTTGTATTGGAGAAACTTCAAAAAATTCCTAATAACCATGTGCAGAATAAGTTAAGAATAAGTTATGATGGTTTAAATGATGATGATGAGCAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGGATGGATCGAAATGATGTTATACTTATATTGAAAGACCGTGGACTTTCTGCTGAAATTGGAATACGTGTCCTTGTTGAGCGAAGTCTTGTGACTGTTGATAATAAGAACATTCTTGGAATGCATGGTTTGATGCGAGATATGGGAAGAGAAATCATTCGCGAGGAATCACCAAGGAGGCCCGAGGAACGTAGCAGGTTGTGGTTTTATCAGGATGTGATTGAGGTATTATCAGAACAAAATGGAAAAGAAGGTGTTTTGGGTTTGGCTTTAGAGCTGCCTATAGCTAATGCAAAATATTTTAGCACTAAAGCATTTGAGAAGATGGAGAGACTCAGATTCCTTAAACTTGATGGGGTATTACTTGTTGGAGATTTTGAATATGTTTCTAGAGACCTGAGATGGCTGTCATGGAATGGATTAAAACAAATTCCTAGAAACTTTTTTAGAGAAAATTTAGTTTCTATCGAATTGGAGTACAGTCAAGTCAAACATCTATGGAAGAAAACTCTGAGGATGGAGAAGCTGAAAATTCTCAATCTTAGTCATTCTCACTTTCTCACACGAAGCCCCGACTTTTCAAACATGCCTAATCTTGAAAAGCTAGTACTTAAAGATTGTCCATTGTTGTCTAAGATTTCTCCAAGCATTGGACATCTCAATAAAATTCTTCTAATAAATTTGGAAGATTGTAGTGGCCTACGTAGCCTCCCAAGAAGCATCTATAAGTTGAAATCTTTGAAAACTCTCATTCTTTCAGGTTGTGTACATATTGACGAGTTGGAAGAAGAACAAATAGAATCTTCAACCACTCTCCATGAAAATATAACTCCAATAACAAGAATATCCTTTTCAGTAATAAGGTCAAAAAGCATTGGATATATTTCTCTGTGCGGCTGTGAGGGTTTTTCACGTTATGTGTTTCTATTTATCATTTGGCTTTGGATGCTGAGATATGCATTGATTTGTATATAA 2409 0.3732 MENEKPPSSSSSKLGFSPNDQVFGRRNRPEPEPEIKIHDVFLSFRGEDTRASFTSHLCTALQNAGIKVFIDDNDLQKGDHISPSLHLAIEQSQISIVVFSINYPDSRWCLDELGKIIECCRTTKHVVVPVFYHVDPSEVRYQRGDFGVSFQRLLNKMEKEVDLDLLCEKRWRVMLRLAANTAGFVILNSRNESEDIKTIVDKVSHLLNKSDLFIAHNPVGIESRVQDVIQLLPIQSNDVLLLGMWGMGGIGKTTIAKAIYNKIGCNFEGRSFIANIRENGEKINGLVSLQEQLLFDICKETAIKIPNIQSGITMLRSRLSLKKVLIVLDDINTLEQLHAFCGSFRYPEWFGPRSIIIITTRDKRLLKGRVDKIYNMSIMTESESLELFSWNAFKQASPMGDFDRISRNVVKYSEGLPLALEVLGSYLYHKTESEWELVLEKLQKIPNNHVQNKLRISYDGLNDDDEQEIFLDIACFFIGMDRNDVILILKDRGLSAEIGIRVLVERSLVTVDNKNILGMHGLMRDMGREIIREESPRRPEERSRLWFYQDVIEVLSEQNGKEGVLGLALELPIANAKYFSTKAFEKMERLRFLKLDGVLLVGDFEYVSRDLRWLSWNGLKQIPRNFFRENLVSIELEYSQVKHLWKKTLRMEKLKILNLSHSHFLTRSPDFSNMPNLEKLVLKDCPLLSKISPSIGHLNKILLINLEDCSGLRSLPRSIYKLKSLKTLILSGCVHIDELEEEQIESSTTLHENITPITRISFSVIRSKSIGYISLCGCEGFSRYVFLFIIWLWMLRYALICI 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi304g00046 802 SMART AAA_5 238 380 IPR003593 GO:0016887
Vivi304g00046 802 Gene3D - 34 213 IPR035897 -
Vivi304g00046 802 FunFam Disease resistance protein (TIR-NBS-LRR class) 34 209 - -
Vivi304g00046 802 SUPERFAMILY L domain-like 569 780 - -
Vivi304g00046 802 SMART till_3 37 181 IPR000157 GO:0007165
Vivi304g00046 802 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 38 751 IPR044974 GO:0006952
Vivi304g00046 802 MobiDBLite consensus disorder prediction 1 31 - -
Vivi304g00046 802 Pfam NB-ARC domain 222 451 IPR002182 GO:0043531
Vivi304g00046 802 Pfam TIR domain 38 210 IPR000157 GO:0007165
Vivi304g00046 802 SUPERFAMILY Toll/Interleukin receptor TIR domain 33 184 IPR035897 -
Vivi304g00046 802 MobiDBLite consensus disorder prediction 1 18 - -
Vivi304g00046 802 PRINTS Disease resistance protein signature 720 736 - -
Vivi304g00046 802 PRINTS Disease resistance protein signature 241 256 - -
Vivi304g00046 802 PRINTS Disease resistance protein signature 413 427 - -
Vivi304g00046 802 PRINTS Disease resistance protein signature 318 332 - -
Vivi304g00046 802 Gene3D - 378 462 IPR042197 -
Vivi304g00046 802 Gene3D Ribonuclease Inhibitor 575 756 IPR032675 -
Vivi304g00046 802 ProSiteProfiles TIR domain profile. 36 207 IPR000157 GO:0007165
Vivi304g00046 802 Gene3D - 214 375 IPR027417 -
Vivi304g00046 802 SUPERFAMILY "Winged helix" DNA-binding domain 450 555 IPR036390 -
Vivi304g00046 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 473 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi304g00046 36 741 WRKY Transcription Factor Family AT4G12020 31.962 1.38e-84 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi304g00046 - - psat:127121188 1176.77