Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi304g00045 ATGGAGAATGAAAAGCCTCCCTCATCCTCCTCATCAAAGTTAGGATTTTCACCAAACGACCAAGTGTTTGGGCGGCGTAATAGGCCAGAACCAGAACCAGAAATAAAGATACATGACGTGTTCTTGAGTTTCAGAGGAGAAGATACTCGCGCTTCCTTCACTTCACATCTCTGTACTGCTCTTCAAAATGCCGGAATTAAGGTTTTTATTGACGATAATGACCTTCAAAAAGGAGATCATATTTCACCATCATTACACCTAGCAATCGAGCAGTCTCAGATTTCTATAGTTGTTTTCTCAATAAATTATCCGGATTCACGATGGTGTCTCGATGAATTGGGAAAAATAATTGAGTGTTGCAGAACCACAAAGCATGTAGTTGTGCCAGTGTTTTACCATGTAGATCCCTCTGAAGTGCGTTATCAGAGGGGCGATTTTGGAGTATCTTTTCAACGTCTTTTGAACAAAATGGAAAAGGAGGTAGATTTGGATTTACTGTGTGAAAAGAGATGGAGAGTGATGCTTCGTCTGGCAGCTAACACCGCAGGGTTCGTAATACTAAACTCCAGGAATGAAAGTGAGGATATCAAAACAATCGTTGACAAAGTTTCACATTTGCTAAATAAGTCAGACTTGTTTATTGCACATAATCCCGTGGGAATTGAATCTCGAGTGCAAGATGTCATTCAACTTCTACCCATTCAATCAAATGATGTTTTACTACTAGGGATGTGGGGCATGGGGGGAATTGGCAAAACAACCATCGCAAAAGCCATTTACAATAAAATTGGCTGCAATTTTGAAGGTAGGAGCTTCATTGCTAATATTAGGGAAAATGGGGAGAAAATTAATGGACTAGTGAGTTTACAAGAGCAACTTCTATTTGATATCTGCAAAGAAACGGCAATCAAGATACCAAACATTCAGTCAGGAATAACAATGTTACGGTCTAGACTCAGCTTAAAAAAAGTACTCATTGTACTTGATGATATAAATACGTTAGAACAACTGCATGCTTTTTGTGGAAGTTTTAGATATCCAGAATGGTTTGGTCCAAGGAGTATAATAATTATCACAACCAGAGATAAGCGTTTACTTAAGGGGAGAGTTGACAAAATATACAATATGTCAATAATGACTGAAAGTGAATCACTAGAGCTTTTTAGTTGGAATGCATTCAAGCAAGCGAGTCCAATGGGAGATTTTGATAGAATTTCCAGAAATGTAGTTAAATATTCTGAGGGATTGCCGCTAGCCCTTGAAGTCCTTGGGTCGTATTTGTATCATAAGACGGAATCGGAATGGGAACTTGTATTGGAGAAACTTCAAAAAATTCCTAATAACCATGTGCAGAATAAGTTAAGAATAAGTTATGATGGTTTAAATGATGATGATGAGCAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGGATGGATCGAAATGATGTTATACTTATATTGAAAGACCGTGGACTTTCTGCTGAAATTGGAATACGTGTCCTTGTTGAGCGAAGTCTTGTGACTGTTGATAATAAGAACATTCTTGGAATGCATGGTTTGATGCGAGATATGGGAAGAGAAATCATTCGCGAGGAATCACCAAGGAGGCCCGAGGAACGTAGCAGGTTGTGGTTTTATCAGGATGTGATTGAGGGAAAAGAAGGTGTTTTGGGTTTGGCTTTAGAGCTGCCTATAGCTAATGCAAAATATTTTAGCACTAAAGCATTTGAGAAGATGGAGAGACTCAGATTCCTTAAACTTGATGGGGTATTACTTGTTGGAGATTTTGAATATGTTTCTAGAGACCTGAGATGGCTGTCATGGAATGGATTAAAACAAATTCCTAGAAACTTTTTTAGAGAAAATTTAGTTTCTATCGAATTGGAGTACAGTCAAGTCAAACATCTATGGAAGAAAACTCTGAGGATGGAGAAGCTGAAAATTCTCAATCTTAGTCATTCTCACTTTCTCACACGAAGCCCCGACTTTTCAAACATGCCTAATCTTGAAAAGCTAGTACTTAAAGATTGTCCATTGTTGTCTAAGATTTCTCCAAGCATTGGACATCTCAATAAAATTCTTCTAATAAATTTGGAAGATTGTAGTGGCCTACGTAGCCTCCCAAGAAGCATCTATAAGTTGAAATCTTTGAAAACTCTCATTCTTTCAGGTTGTGTACATATTGACGAGTTGGAAGAAGAACAAATAGAATCTTCAACCACTCTCCATGAAAATATAACTCCAATAACAAGAATATCCTTTTCAGTAATAAGGTCAAAAAGCATTGGATATATTTCTCTGTGCGGCTGTGAGGGTTTTTCACGTTATGTGTTTCTATTTATCATTTGGCTTTGGATGCTGAGATATGCATTGATTTGTATATAA 2391 0.3743 MENEKPPSSSSSKLGFSPNDQVFGRRNRPEPEPEIKIHDVFLSFRGEDTRASFTSHLCTALQNAGIKVFIDDNDLQKGDHISPSLHLAIEQSQISIVVFSINYPDSRWCLDELGKIIECCRTTKHVVVPVFYHVDPSEVRYQRGDFGVSFQRLLNKMEKEVDLDLLCEKRWRVMLRLAANTAGFVILNSRNESEDIKTIVDKVSHLLNKSDLFIAHNPVGIESRVQDVIQLLPIQSNDVLLLGMWGMGGIGKTTIAKAIYNKIGCNFEGRSFIANIRENGEKINGLVSLQEQLLFDICKETAIKIPNIQSGITMLRSRLSLKKVLIVLDDINTLEQLHAFCGSFRYPEWFGPRSIIIITTRDKRLLKGRVDKIYNMSIMTESESLELFSWNAFKQASPMGDFDRISRNVVKYSEGLPLALEVLGSYLYHKTESEWELVLEKLQKIPNNHVQNKLRISYDGLNDDDEQEIFLDIACFFIGMDRNDVILILKDRGLSAEIGIRVLVERSLVTVDNKNILGMHGLMRDMGREIIREESPRRPEERSRLWFYQDVIEGKEGVLGLALELPIANAKYFSTKAFEKMERLRFLKLDGVLLVGDFEYVSRDLRWLSWNGLKQIPRNFFRENLVSIELEYSQVKHLWKKTLRMEKLKILNLSHSHFLTRSPDFSNMPNLEKLVLKDCPLLSKISPSIGHLNKILLINLEDCSGLRSLPRSIYKLKSLKTLILSGCVHIDELEEEQIESSTTLHENITPITRISFSVIRSKSIGYISLCGCEGFSRYVFLFIIWLWMLRYALICI 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi304g00045 796 SMART AAA_5 238 380 IPR003593 GO:0016887
Vivi304g00045 796 SUPERFAMILY L domain-like 563 774 - -
Vivi304g00045 796 Pfam NB-ARC domain 222 451 IPR002182 GO:0043531
Vivi304g00045 796 Gene3D - 34 213 IPR035897 -
Vivi304g00045 796 SMART till_3 37 181 IPR000157 GO:0007165
Vivi304g00045 796 Gene3D - 378 462 IPR042197 -
Vivi304g00045 796 MobiDBLite consensus disorder prediction 1 31 - -
Vivi304g00045 796 SUPERFAMILY "Winged helix" DNA-binding domain 450 553 IPR036390 -
Vivi304g00045 796 Pfam TIR domain 38 210 IPR000157 GO:0007165
Vivi304g00045 796 Gene3D Ribonuclease Inhibitor 569 750 IPR032675 -
Vivi304g00045 796 SUPERFAMILY Toll/Interleukin receptor TIR domain 33 184 IPR035897 -
Vivi304g00045 796 MobiDBLite consensus disorder prediction 1 18 - -
Vivi304g00045 796 Gene3D - 214 375 IPR027417 -
Vivi304g00045 796 PRINTS Disease resistance protein signature 413 427 - -
Vivi304g00045 796 PRINTS Disease resistance protein signature 714 730 - -
Vivi304g00045 796 PRINTS Disease resistance protein signature 241 256 - -
Vivi304g00045 796 PRINTS Disease resistance protein signature 318 332 - -
Vivi304g00045 796 ProSiteProfiles TIR domain profile. 36 207 IPR000157 GO:0007165
Vivi304g00045 796 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 473 IPR027417 -
Vivi304g00045 796 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 38 745 IPR044974 GO:0006952
Vivi304g00045 796 FunFam Disease resistance protein (TIR-NBS-LRR class) 34 209 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi304g00045 36 735 WRKY Transcription Factor Family AT4G12020 32.011 4.99e-83 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi304g00045 - - psat:127121188 1162.52